Protein–RNA interactions for Protein: P42582

Nkx2-5, Homeobox protein Nkx-2.5, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-5P42582 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx2-5P42582 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx2-5P42582 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx2-5P42582 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx2-5P42582 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.69■□□□□ 0.9
Nkx2-5P42582 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.69■□□□□ 0.9
Nkx2-5P42582 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Nkx2-5P42582 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx2-5P42582 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx2-5P42582 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx2-5P42582 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx2-5P42582 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx2-5P42582 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.68■□□□□ 0.9
Nkx2-5P42582 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx2-5P42582 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.68■□□□□ 0.9
Nkx2-5P42582 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx2-5P42582 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx2-5P42582 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.68■□□□□ 0.9
Nkx2-5P42582 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.68■□□□□ 0.9
Nkx2-5P42582 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx2-5P42582 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx2-5P42582 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx2-5P42582 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Nkx2-5P42582 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx2-5P42582 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.68■□□□□ 0.9
Nkx2-5P42582 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx2-5P42582 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx2-5P42582 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx2-5P42582 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.67■□□□□ 0.9
Nkx2-5P42582 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx2-5P42582 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx2-5P42582 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.67■□□□□ 0.9
Nkx2-5P42582 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.67■□□□□ 0.9
Nkx2-5P42582 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx2-5P42582 AA386476-201ENSMUST00000098781 1665 ntBASIC20.67■□□□□ 0.9
Nkx2-5P42582 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx2-5P42582 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx2-5P42582 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Nkx2-5P42582 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx2-5P42582 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.66■□□□□ 0.9
Nkx2-5P42582 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Nkx2-5P42582 Gm9870-201ENSMUST00000063874 645 ntBASIC20.66■□□□□ 0.9
Nkx2-5P42582 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.66■□□□□ 0.9
Nkx2-5P42582 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Nkx2-5P42582 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx2-5P42582 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Nkx2-5P42582 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx2-5P42582 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx2-5P42582 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx2-5P42582 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx2-5P42582 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx2-5P42582 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx2-5P42582 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx2-5P42582 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx2-5P42582 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx2-5P42582 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.65■□□□□ 0.9
Nkx2-5P42582 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.65■□□□□ 0.9
Nkx2-5P42582 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx2-5P42582 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx2-5P42582 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx2-5P42582 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Nkx2-5P42582 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Nkx2-5P42582 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nkx2-5P42582 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Nkx2-5P42582 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.64■□□□□ 0.89
Nkx2-5P42582 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nkx2-5P42582 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nkx2-5P42582 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nkx2-5P42582 Rarb-207ENSMUST00000225921 2756 ntBASIC20.63■□□□□ 0.89
Nkx2-5P42582 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Nkx2-5P42582 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nkx2-5P42582 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nkx2-5P42582 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nkx2-5P42582 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nkx2-5P42582 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nkx2-5P42582 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nkx2-5P42582 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nkx2-5P42582 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.63■□□□□ 0.89
Nkx2-5P42582 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nkx2-5P42582 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.63■□□□□ 0.89
Nkx2-5P42582 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Nkx2-5P42582 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nkx2-5P42582 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nkx2-5P42582 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Nkx2-5P42582 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nkx2-5P42582 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Nkx2-5P42582 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Nkx2-5P42582 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx2-5P42582 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.62■□□□□ 0.89
Nkx2-5P42582 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx2-5P42582 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx2-5P42582 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx2-5P42582 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.62■□□□□ 0.89
Nkx2-5P42582 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.62■□□□□ 0.89
Nkx2-5P42582 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx2-5P42582 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Nkx2-5P42582 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx2-5P42582 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.61■□□□□ 0.89
Nkx2-5P42582 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx2-5P42582 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms