Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Gm7291-201ENSMUST00000199147 382 ntBASIC18.62■□□□□ 0.57
Tnfsf9P41274 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfsf9P41274 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfsf9P41274 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfsf9P41274 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Tnfsf9P41274 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfsf9P41274 AA386476-201ENSMUST00000098781 1665 ntBASIC18.62■□□□□ 0.57
Tnfsf9P41274 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Tnfsf9P41274 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.62■□□□□ 0.57
Tnfsf9P41274 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.62■□□□□ 0.57
Tnfsf9P41274 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfsf9P41274 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfsf9P41274 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfsf9P41274 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Tnfsf9P41274 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfsf9P41274 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.61■□□□□ 0.57
Tnfsf9P41274 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfsf9P41274 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfsf9P41274 Gm27405-201ENSMUST00000184201 112 ntBASIC18.61■□□□□ 0.57
Tnfsf9P41274 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.61■□□□□ 0.57
Tnfsf9P41274 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.61■□□□□ 0.57
Tnfsf9P41274 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Tnfsf9P41274 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Tnfsf9P41274 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfsf9P41274 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfsf9P41274 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfsf9P41274 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.6■□□□□ 0.57
Tnfsf9P41274 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfsf9P41274 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfsf9P41274 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.6■□□□□ 0.57
Tnfsf9P41274 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfsf9P41274 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Tnfsf9P41274 Gm10033-202ENSMUST00000211874 928 ntBASIC18.6■□□□□ 0.57
Tnfsf9P41274 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfsf9P41274 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Tnfsf9P41274 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfsf9P41274 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Tnfsf9P41274 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfsf9P41274 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfsf9P41274 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfsf9P41274 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfsf9P41274 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Tnfsf9P41274 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfsf9P41274 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Tnfsf9P41274 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfsf9P41274 AV356131-201ENSMUST00000206201 750 ntBASIC18.59■□□□□ 0.57
Tnfsf9P41274 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.59■□□□□ 0.57
Tnfsf9P41274 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.59■□□□□ 0.57
Tnfsf9P41274 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.59■□□□□ 0.57
Tnfsf9P41274 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Tnfsf9P41274 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.59■□□□□ 0.57
Tnfsf9P41274 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Tnfsf9P41274 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.58■□□□□ 0.56
Tnfsf9P41274 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Tnfsf9P41274 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.58■□□□□ 0.56
Tnfsf9P41274 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Tnfsf9P41274 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.58■□□□□ 0.56
Tnfsf9P41274 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tnfsf9P41274 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfsf9P41274 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfsf9P41274 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.57■□□□□ 0.56
Tnfsf9P41274 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Tnfsf9P41274 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfsf9P41274 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfsf9P41274 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfsf9P41274 Gm10849-201ENSMUST00000100397 618 ntBASIC18.57■□□□□ 0.56
Tnfsf9P41274 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.57■□□□□ 0.56
Tnfsf9P41274 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfsf9P41274 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfsf9P41274 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfsf9P41274 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfsf9P41274 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfsf9P41274 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfsf9P41274 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfsf9P41274 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfsf9P41274 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfsf9P41274 Reep4-203ENSMUST00000226563 1444 ntBASIC18.56■□□□□ 0.56
Tnfsf9P41274 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfsf9P41274 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfsf9P41274 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Tnfsf9P41274 Gm13234-201ENSMUST00000120010 747 ntBASIC18.55■□□□□ 0.56
Tnfsf9P41274 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfsf9P41274 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfsf9P41274 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfsf9P41274 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfsf9P41274 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Tnfsf9P41274 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfsf9P41274 Notumos-201ENSMUST00000151998 2659 ntBASIC18.55■□□□□ 0.56
Tnfsf9P41274 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfsf9P41274 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Tnfsf9P41274 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfsf9P41274 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfsf9P41274 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.54■□□□□ 0.56
Tnfsf9P41274 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
Tnfsf9P41274 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.54■□□□□ 0.56
Tnfsf9P41274 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfsf9P41274 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfsf9P41274 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfsf9P41274 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Tnfsf9P41274 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms