Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh4P39038 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh4P39038 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh4P39038 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh4P39038 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh4P39038 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh4P39038 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdh4P39038 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Cdh4P39038 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdh4P39038 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdh4P39038 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Cdh4P39038 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.59■□□□□ 0.57
Cdh4P39038 Gm40848-201ENSMUST00000221998 324 ntBASIC18.59■□□□□ 0.57
Cdh4P39038 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cdh4P39038 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdh4P39038 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdh4P39038 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cdh4P39038 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.58■□□□□ 0.57
Cdh4P39038 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cdh4P39038 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cdh4P39038 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cdh4P39038 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cdh4P39038 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.58■□□□□ 0.57
Cdh4P39038 AA386476-201ENSMUST00000098781 1665 ntBASIC18.58■□□□□ 0.57
Cdh4P39038 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cdh4P39038 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdh4P39038 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdh4P39038 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.57■□□□□ 0.56
Cdh4P39038 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdh4P39038 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Cdh4P39038 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdh4P39038 Gm43060-201ENSMUST00000200621 289 ntBASIC18.57■□□□□ 0.56
Cdh4P39038 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
Cdh4P39038 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdh4P39038 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdh4P39038 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Cdh4P39038 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.57■□□□□ 0.56
Cdh4P39038 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Cdh4P39038 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdh4P39038 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdh4P39038 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdh4P39038 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdh4P39038 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.57■□□□□ 0.56
Cdh4P39038 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdh4P39038 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh4P39038 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh4P39038 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh4P39038 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh4P39038 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Cdh4P39038 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh4P39038 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Cdh4P39038 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh4P39038 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh4P39038 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh4P39038 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh4P39038 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh4P39038 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh4P39038 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh4P39038 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdh4P39038 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Cdh4P39038 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cdh4P39038 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Cdh4P39038 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.55■□□□□ 0.56
Cdh4P39038 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Cdh4P39038 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdh4P39038 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdh4P39038 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdh4P39038 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdh4P39038 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cdh4P39038 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cdh4P39038 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdh4P39038 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.54■□□□□ 0.56
Cdh4P39038 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdh4P39038 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cdh4P39038 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdh4P39038 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.54■□□□□ 0.56
Cdh4P39038 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdh4P39038 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Cdh4P39038 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdh4P39038 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdh4P39038 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdh4P39038 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cdh4P39038 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdh4P39038 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdh4P39038 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.53■□□□□ 0.56
Cdh4P39038 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdh4P39038 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdh4P39038 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cdh4P39038 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Cdh4P39038 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdh4P39038 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Cdh4P39038 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Cdh4P39038 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdh4P39038 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdh4P39038 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdh4P39038 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdh4P39038 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
Cdh4P39038 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.52■□□□□ 0.56
Cdh4P39038 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.52■□□□□ 0.56
Cdh4P39038 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms