Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
Sox5P35710 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sox5P35710 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sox5P35710 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sox5P35710 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Sox5P35710 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sox5P35710 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.25■□□□□ 0.99
Sox5P35710 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sox5P35710 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sox5P35710 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sox5P35710 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
Sox5P35710 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sox5P35710 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
Sox5P35710 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sox5P35710 Gm43231-201ENSMUST00000202960 2258 ntBASIC21.25■□□□□ 0.99
Sox5P35710 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sox5P35710 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sox5P35710 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sox5P35710 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sox5P35710 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sox5P35710 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sox5P35710 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sox5P35710 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.24■□□□□ 0.99
Sox5P35710 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sox5P35710 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sox5P35710 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sox5P35710 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sox5P35710 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Sox5P35710 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sox5P35710 Gm22238-201ENSMUST00000175222 88 ntBASIC21.23■□□□□ 0.99
Sox5P35710 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sox5P35710 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sox5P35710 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC21.23■□□□□ 0.99
Sox5P35710 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.23■□□□□ 0.99
Sox5P35710 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Sox5P35710 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sox5P35710 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Sox5P35710 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.22■□□□□ 0.99
Sox5P35710 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
Sox5P35710 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sox5P35710 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sox5P35710 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sox5P35710 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sox5P35710 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sox5P35710 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Sox5P35710 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sox5P35710 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sox5P35710 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Sox5P35710 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sox5P35710 Gm15546-201ENSMUST00000122095 826 ntBASIC21.21■□□□□ 0.99
Sox5P35710 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Sox5P35710 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.21■□□□□ 0.99
Sox5P35710 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sox5P35710 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sox5P35710 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sox5P35710 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Sox5P35710 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Sox5P35710 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sox5P35710 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Sox5P35710 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sox5P35710 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Sox5P35710 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Sox5P35710 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sox5P35710 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sox5P35710 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sox5P35710 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC21.19■□□□□ 0.98
Sox5P35710 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Sox5P35710 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.19■□□□□ 0.98
Sox5P35710 AC124603.1-201ENSMUST00000223843 308 ntBASIC21.19■□□□□ 0.98
Sox5P35710 Gm9959-201ENSMUST00000068277 390 ntBASIC21.19■□□□□ 0.98
Sox5P35710 Gm18688-201ENSMUST00000204695 1859 ntBASIC21.19■□□□□ 0.98
Sox5P35710 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Sox5P35710 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sox5P35710 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Sox5P35710 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sox5P35710 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Sox5P35710 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sox5P35710 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Sox5P35710 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Sox5P35710 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sox5P35710 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.18■□□□□ 0.98
Sox5P35710 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Sox5P35710 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.18■□□□□ 0.98
Sox5P35710 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.18■□□□□ 0.98
Sox5P35710 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sox5P35710 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sox5P35710 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sox5P35710 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sox5P35710 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sox5P35710 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Sox5P35710 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sox5P35710 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sox5P35710 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Sox5P35710 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.17■□□□□ 0.98
Sox5P35710 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sox5P35710 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sox5P35710 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sox5P35710 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC21.17■□□□□ 0.98
Sox5P35710 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sox5P35710 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms