Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Foxa1P35582 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Foxa1P35582 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.02■□□□□ 0.48
Foxa1P35582 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.02■□□□□ 0.48
Foxa1P35582 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Foxa1P35582 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Foxa1P35582 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Foxa1P35582 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Foxa1P35582 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.01■□□□□ 0.47
Foxa1P35582 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Foxa1P35582 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Foxa1P35582 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Foxa1P35582 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Foxa1P35582 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Foxa1P35582 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.01■□□□□ 0.47
Foxa1P35582 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Foxa1P35582 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Foxa1P35582 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Foxa1P35582 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Foxa1P35582 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Foxa1P35582 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
Foxa1P35582 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Foxa1P35582 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Foxa1P35582 Gm20100-201ENSMUST00000209418 2272 ntBASIC18■□□□□ 0.47
Foxa1P35582 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18■□□□□ 0.47
Foxa1P35582 Gm26833-201ENSMUST00000180899 440 ntBASIC18■□□□□ 0.47
Foxa1P35582 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Foxa1P35582 Gm42911-201ENSMUST00000199360 1630 ntBASIC18■□□□□ 0.47
Foxa1P35582 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Foxa1P35582 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Foxa1P35582 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Foxa1P35582 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Foxa1P35582 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Foxa1P35582 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Foxa1P35582 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Foxa1P35582 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.99■□□□□ 0.47
Foxa1P35582 Gm11421-201ENSMUST00000122124 294 ntBASIC17.99■□□□□ 0.47
Foxa1P35582 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Foxa1P35582 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Foxa1P35582 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Foxa1P35582 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.99■□□□□ 0.47
Foxa1P35582 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Foxa1P35582 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Foxa1P35582 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Foxa1P35582 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Foxa1P35582 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Foxa1P35582 Gm40848-201ENSMUST00000221998 324 ntBASIC17.98■□□□□ 0.47
Foxa1P35582 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Foxa1P35582 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Foxa1P35582 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Foxa1P35582 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Foxa1P35582 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Foxa1P35582 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Foxa1P35582 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Foxa1P35582 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Foxa1P35582 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.97■□□□□ 0.47
Foxa1P35582 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
Foxa1P35582 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Foxa1P35582 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.97■□□□□ 0.47
Foxa1P35582 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Foxa1P35582 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Foxa1P35582 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Foxa1P35582 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Foxa1P35582 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Foxa1P35582 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Foxa1P35582 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Foxa1P35582 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Foxa1P35582 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Foxa1P35582 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Foxa1P35582 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Foxa1P35582 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Foxa1P35582 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Foxa1P35582 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Foxa1P35582 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Foxa1P35582 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Foxa1P35582 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Foxa1P35582 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.95■□□□□ 0.46
Foxa1P35582 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.95■□□□□ 0.46
Foxa1P35582 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Foxa1P35582 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Foxa1P35582 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Foxa1P35582 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Foxa1P35582 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Foxa1P35582 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Foxa1P35582 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.94■□□□□ 0.46
Foxa1P35582 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Foxa1P35582 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Foxa1P35582 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Foxa1P35582 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Foxa1P35582 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Foxa1P35582 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Foxa1P35582 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Foxa1P35582 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Foxa1P35582 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Foxa1P35582 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Foxa1P35582 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Foxa1P35582 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Foxa1P35582 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Foxa1P35582 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Foxa1P35582 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms