Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Mmp13P33435 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.87■□□□□ 0.77
Mmp13P33435 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Mmp13P33435 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Mmp13P33435 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.87■□□□□ 0.77
Mmp13P33435 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Mmp13P33435 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Mmp13P33435 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Mmp13P33435 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Mmp13P33435 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.86■□□□□ 0.77
Mmp13P33435 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Mmp13P33435 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Mmp13P33435 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.86■□□□□ 0.77
Mmp13P33435 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mmp13P33435 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Mmp13P33435 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mmp13P33435 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mmp13P33435 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mmp13P33435 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Mmp13P33435 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Mmp13P33435 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mmp13P33435 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mmp13P33435 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mmp13P33435 Gm12821-201ENSMUST00000120022 600 ntBASIC19.85■□□□□ 0.77
Mmp13P33435 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mmp13P33435 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mmp13P33435 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mmp13P33435 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mmp13P33435 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mmp13P33435 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Mmp13P33435 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mmp13P33435 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mmp13P33435 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mmp13P33435 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mmp13P33435 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mmp13P33435 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mmp13P33435 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mmp13P33435 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mmp13P33435 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mmp13P33435 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mmp13P33435 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mmp13P33435 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mmp13P33435 Gm43530-201ENSMUST00000195920 274 ntBASIC19.83■□□□□ 0.77
Mmp13P33435 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Mmp13P33435 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Mmp13P33435 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mmp13P33435 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Mmp13P33435 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mmp13P33435 Gm15039-201ENSMUST00000118914 875 ntBASIC19.82■□□□□ 0.76
Mmp13P33435 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.82■□□□□ 0.76
Mmp13P33435 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mmp13P33435 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
Mmp13P33435 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Mmp13P33435 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mmp13P33435 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mmp13P33435 Golph3-205ENSMUST00000228671 2842 ntBASIC19.82■□□□□ 0.76
Mmp13P33435 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mmp13P33435 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mmp13P33435 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mmp13P33435 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Mmp13P33435 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mmp13P33435 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Mmp13P33435 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mmp13P33435 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.81■□□□□ 0.76
Mmp13P33435 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mmp13P33435 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.81■□□□□ 0.76
Mmp13P33435 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Mmp13P33435 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mmp13P33435 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Mmp13P33435 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mmp13P33435 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mmp13P33435 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mmp13P33435 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Mmp13P33435 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
Mmp13P33435 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mmp13P33435 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mmp13P33435 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.8■□□□□ 0.76
Mmp13P33435 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mmp13P33435 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mmp13P33435 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mmp13P33435 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mmp13P33435 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mmp13P33435 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mmp13P33435 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Mmp13P33435 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Mmp13P33435 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.79■□□□□ 0.76
Mmp13P33435 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mmp13P33435 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.79■□□□□ 0.76
Mmp13P33435 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Mmp13P33435 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.79■□□□□ 0.76
Mmp13P33435 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mmp13P33435 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Mmp13P33435 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mmp13P33435 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mmp13P33435 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.78■□□□□ 0.76
Mmp13P33435 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Mmp13P33435 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.78■□□□□ 0.76
Mmp13P33435 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mmp13P33435 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mmp13P33435 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms