Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a11P31650 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a11P31650 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.42■□□□□ 0.54
Slc6a11P31650 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a11P31650 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.42■□□□□ 0.54
Slc6a11P31650 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a11P31650 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a11P31650 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a11P31650 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a11P31650 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc6a11P31650 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Slc6a11P31650 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.41■□□□□ 0.54
Slc6a11P31650 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Slc6a11P31650 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Slc6a11P31650 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc6a11P31650 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc6a11P31650 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc6a11P31650 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Slc6a11P31650 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc6a11P31650 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Slc6a11P31650 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Slc6a11P31650 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc6a11P31650 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.4■□□□□ 0.54
Slc6a11P31650 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.4■□□□□ 0.54
Slc6a11P31650 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Slc6a11P31650 Mir6236-201ENSMUST00000184437 123 ntBASIC18.4■□□□□ 0.54
Slc6a11P31650 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.4■□□□□ 0.54
Slc6a11P31650 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Slc6a11P31650 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc6a11P31650 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Slc6a11P31650 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc6a11P31650 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Slc6a11P31650 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Slc6a11P31650 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a11P31650 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Slc6a11P31650 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Slc6a11P31650 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
Slc6a11P31650 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a11P31650 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.39■□□□□ 0.53
Slc6a11P31650 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a11P31650 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a11P31650 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a11P31650 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a11P31650 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a11P31650 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a11P31650 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.39■□□□□ 0.53
Slc6a11P31650 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a11P31650 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.39■□□□□ 0.53
Slc6a11P31650 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a11P31650 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Slc6a11P31650 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.38■□□□□ 0.53
Slc6a11P31650 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a11P31650 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a11P31650 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a11P31650 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a11P31650 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Slc6a11P31650 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a11P31650 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a11P31650 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a11P31650 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a11P31650 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a11P31650 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a11P31650 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a11P31650 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.37■□□□□ 0.53
Slc6a11P31650 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.37■□□□□ 0.53
Slc6a11P31650 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Slc6a11P31650 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a11P31650 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a11P31650 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a11P31650 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a11P31650 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a11P31650 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a11P31650 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a11P31650 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a11P31650 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Slc6a11P31650 Golph3-205ENSMUST00000228671 2842 ntBASIC18.36■□□□□ 0.53
Slc6a11P31650 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a11P31650 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a11P31650 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a11P31650 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a11P31650 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
Slc6a11P31650 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a11P31650 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a11P31650 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a11P31650 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Slc6a11P31650 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a11P31650 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a11P31650 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Slc6a11P31650 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a11P31650 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a11P31650 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a11P31650 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Slc6a11P31650 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a11P31650 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a11P31650 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a11P31650 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a11P31650 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Slc6a11P31650 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.34■□□□□ 0.53
Slc6a11P31650 Gm43530-201ENSMUST00000195920 274 ntBASIC18.34■□□□□ 0.53
Slc6a11P31650 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms