Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.02■□□□□ 0.8
Nfkb1P25799 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nfkb1P25799 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nfkb1P25799 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nfkb1P25799 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nfkb1P25799 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Nfkb1P25799 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
Nfkb1P25799 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nfkb1P25799 Gm13234-201ENSMUST00000120010 747 ntBASIC20.01■□□□□ 0.79
Nfkb1P25799 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.01■□□□□ 0.79
Nfkb1P25799 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.01■□□□□ 0.79
Nfkb1P25799 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.01■□□□□ 0.79
Nfkb1P25799 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nfkb1P25799 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Nfkb1P25799 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nfkb1P25799 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nfkb1P25799 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Nfkb1P25799 Hsf1-207ENSMUST00000228371 2102 ntBASIC20■□□□□ 0.79
Nfkb1P25799 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nfkb1P25799 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Nfkb1P25799 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20■□□□□ 0.79
Nfkb1P25799 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Nfkb1P25799 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nfkb1P25799 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20■□□□□ 0.79
Nfkb1P25799 Gm15043-201ENSMUST00000118843 1543 ntBASIC20■□□□□ 0.79
Nfkb1P25799 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nfkb1P25799 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
Nfkb1P25799 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nfkb1P25799 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.99■□□□□ 0.79
Nfkb1P25799 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nfkb1P25799 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nfkb1P25799 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Nfkb1P25799 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Nfkb1P25799 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.99■□□□□ 0.79
Nfkb1P25799 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nfkb1P25799 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Nfkb1P25799 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.99■□□□□ 0.79
Nfkb1P25799 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nfkb1P25799 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.99■□□□□ 0.79
Nfkb1P25799 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Nfkb1P25799 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.98■□□□□ 0.79
Nfkb1P25799 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.98■□□□□ 0.79
Nfkb1P25799 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nfkb1P25799 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nfkb1P25799 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nfkb1P25799 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Nfkb1P25799 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nfkb1P25799 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.98■□□□□ 0.79
Nfkb1P25799 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nfkb1P25799 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Nfkb1P25799 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nfkb1P25799 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
Nfkb1P25799 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nfkb1P25799 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Nfkb1P25799 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Nfkb1P25799 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nfkb1P25799 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nfkb1P25799 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nfkb1P25799 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nfkb1P25799 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nfkb1P25799 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Nfkb1P25799 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nfkb1P25799 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nfkb1P25799 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nfkb1P25799 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nfkb1P25799 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.96■□□□□ 0.79
Nfkb1P25799 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nfkb1P25799 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.96■□□□□ 0.79
Nfkb1P25799 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
Nfkb1P25799 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nfkb1P25799 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nfkb1P25799 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nfkb1P25799 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.95■□□□□ 0.78
Nfkb1P25799 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.95■□□□□ 0.78
Nfkb1P25799 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nfkb1P25799 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nfkb1P25799 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nfkb1P25799 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.95■□□□□ 0.78
Nfkb1P25799 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nfkb1P25799 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Nfkb1P25799 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nfkb1P25799 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nfkb1P25799 AA386476-201ENSMUST00000098781 1665 ntBASIC19.94■□□□□ 0.78
Nfkb1P25799 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nfkb1P25799 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Nfkb1P25799 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Nfkb1P25799 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.94■□□□□ 0.78
Nfkb1P25799 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nfkb1P25799 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Nfkb1P25799 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nfkb1P25799 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nfkb1P25799 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nfkb1P25799 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nfkb1P25799 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nfkb1P25799 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nfkb1P25799 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nfkb1P25799 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nfkb1P25799 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.93■□□□□ 0.78
Nfkb1P25799 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Nfkb1P25799 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms