Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Clk1P22518 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clk1P22518 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clk1P22518 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clk1P22518 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clk1P22518 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.96■□□□□ 0.47
Clk1P22518 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.96■□□□□ 0.47
Clk1P22518 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.96■□□□□ 0.47
Clk1P22518 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Clk1P22518 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Clk1P22518 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Clk1P22518 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.96■□□□□ 0.47
Clk1P22518 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Clk1P22518 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
Clk1P22518 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
Clk1P22518 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Clk1P22518 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.95■□□□□ 0.46
Clk1P22518 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Clk1P22518 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.95■□□□□ 0.46
Clk1P22518 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clk1P22518 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clk1P22518 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clk1P22518 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clk1P22518 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Clk1P22518 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.95■□□□□ 0.46
Clk1P22518 Gm21956-201ENSMUST00000179946 522 ntBASIC17.95■□□□□ 0.46
Clk1P22518 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Clk1P22518 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Clk1P22518 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clk1P22518 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.95■□□□□ 0.46
Clk1P22518 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Clk1P22518 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clk1P22518 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clk1P22518 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clk1P22518 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clk1P22518 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Clk1P22518 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Clk1P22518 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clk1P22518 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clk1P22518 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clk1P22518 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Clk1P22518 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clk1P22518 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Clk1P22518 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clk1P22518 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Clk1P22518 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Clk1P22518 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clk1P22518 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clk1P22518 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clk1P22518 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clk1P22518 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clk1P22518 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Clk1P22518 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clk1P22518 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.92■□□□□ 0.46
Clk1P22518 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.92■□□□□ 0.46
Clk1P22518 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.92■□□□□ 0.46
Clk1P22518 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clk1P22518 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clk1P22518 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Clk1P22518 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clk1P22518 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Clk1P22518 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clk1P22518 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Clk1P22518 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.91■□□□□ 0.46
Clk1P22518 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Clk1P22518 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.91■□□□□ 0.46
Clk1P22518 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clk1P22518 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clk1P22518 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clk1P22518 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.91■□□□□ 0.46
Clk1P22518 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Clk1P22518 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clk1P22518 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clk1P22518 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Clk1P22518 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Clk1P22518 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clk1P22518 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clk1P22518 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.9■□□□□ 0.46
Clk1P22518 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clk1P22518 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clk1P22518 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.89■□□□□ 0.46
Clk1P22518 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Clk1P22518 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Clk1P22518 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clk1P22518 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clk1P22518 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.89■□□□□ 0.45
Clk1P22518 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clk1P22518 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.89■□□□□ 0.45
Clk1P22518 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.89■□□□□ 0.45
Clk1P22518 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clk1P22518 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clk1P22518 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clk1P22518 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clk1P22518 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Clk1P22518 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.89■□□□□ 0.45
Clk1P22518 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clk1P22518 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clk1P22518 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clk1P22518 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Clk1P22518 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms