Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
BdnfP21237 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BdnfP21237 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
BdnfP21237 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BdnfP21237 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BdnfP21237 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BdnfP21237 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BdnfP21237 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
BdnfP21237 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BdnfP21237 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
BdnfP21237 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BdnfP21237 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BdnfP21237 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BdnfP21237 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
BdnfP21237 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
BdnfP21237 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.56■□□□□ 0.56
BdnfP21237 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.56■□□□□ 0.56
BdnfP21237 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.56■□□□□ 0.56
BdnfP21237 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BdnfP21237 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
BdnfP21237 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BdnfP21237 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.56■□□□□ 0.56
BdnfP21237 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BdnfP21237 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BdnfP21237 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
BdnfP21237 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BdnfP21237 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
BdnfP21237 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
BdnfP21237 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
BdnfP21237 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BdnfP21237 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.55■□□□□ 0.56
BdnfP21237 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BdnfP21237 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
BdnfP21237 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BdnfP21237 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BdnfP21237 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BdnfP21237 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
BdnfP21237 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BdnfP21237 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.54■□□□□ 0.56
BdnfP21237 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
BdnfP21237 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BdnfP21237 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BdnfP21237 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BdnfP21237 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
BdnfP21237 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
BdnfP21237 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
BdnfP21237 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
BdnfP21237 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BdnfP21237 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BdnfP21237 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
BdnfP21237 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
BdnfP21237 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
BdnfP21237 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BdnfP21237 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
BdnfP21237 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
BdnfP21237 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BdnfP21237 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
BdnfP21237 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
BdnfP21237 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BdnfP21237 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
BdnfP21237 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
BdnfP21237 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BdnfP21237 Gm45102-201ENSMUST00000207427 857 ntBASIC18.52■□□□□ 0.56
BdnfP21237 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
BdnfP21237 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
BdnfP21237 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
BdnfP21237 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
BdnfP21237 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
BdnfP21237 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
BdnfP21237 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BdnfP21237 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BdnfP21237 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
BdnfP21237 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BdnfP21237 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
BdnfP21237 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BdnfP21237 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BdnfP21237 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
BdnfP21237 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
BdnfP21237 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.51■□□□□ 0.55
BdnfP21237 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
BdnfP21237 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.5■□□□□ 0.55
BdnfP21237 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BdnfP21237 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BdnfP21237 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
BdnfP21237 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BdnfP21237 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BdnfP21237 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BdnfP21237 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.5■□□□□ 0.55
BdnfP21237 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BdnfP21237 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.5■□□□□ 0.55
BdnfP21237 Rps24-207ENSMUST00000224568 714 ntBASIC18.5■□□□□ 0.55
BdnfP21237 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BdnfP21237 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BdnfP21237 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BdnfP21237 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.5■□□□□ 0.55
BdnfP21237 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
BdnfP21237 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BdnfP21237 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
BdnfP21237 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.49■□□□□ 0.55
BdnfP21237 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms