Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
P04213 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
P04213 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
P04213 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
P04213 Gm21956-201ENSMUST00000179946 522 ntBASIC18.68■□□□□ 0.58
P04213 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
P04213 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
P04213 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P04213 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P04213 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P04213 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
P04213 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
P04213 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P04213 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.67■□□□□ 0.58
P04213 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
P04213 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P04213 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.67■□□□□ 0.58
P04213 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.67■□□□□ 0.58
P04213 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
P04213 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P04213 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
P04213 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
P04213 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
P04213 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
P04213 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P04213 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
P04213 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
P04213 Serp2-204ENSMUST00000228055 705 ntBASIC18.66■□□□□ 0.58
P04213 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
P04213 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
P04213 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P04213 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
P04213 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
P04213 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
P04213 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P04213 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
P04213 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
P04213 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P04213 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.65■□□□□ 0.58
P04213 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
P04213 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P04213 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.65■□□□□ 0.58
P04213 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
P04213 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
P04213 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
P04213 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
P04213 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
P04213 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
P04213 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
P04213 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
P04213 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
P04213 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
P04213 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
P04213 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
P04213 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
P04213 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
P04213 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
P04213 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
P04213 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.64■□□□□ 0.57
P04213 Golph3-205ENSMUST00000228671 2842 ntBASIC18.64■□□□□ 0.57
P04213 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
P04213 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
P04213 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
P04213 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P04213 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
P04213 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
P04213 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P04213 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
P04213 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
P04213 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.63■□□□□ 0.57
P04213 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
P04213 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
P04213 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
P04213 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
P04213 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
P04213 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
P04213 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
P04213 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
P04213 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.62■□□□□ 0.57
P04213 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
P04213 Gm43137-201ENSMUST00000198052 594 ntBASIC18.62■□□□□ 0.57
P04213 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.62■□□□□ 0.57
P04213 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
P04213 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
P04213 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.62■□□□□ 0.57
P04213 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
P04213 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
P04213 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
P04213 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
P04213 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
P04213 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
P04213 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
P04213 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
P04213 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
P04213 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.61■□□□□ 0.57
P04213 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
P04213 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
P04213 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
P04213 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
P04213 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms