Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.52■□□□□ 0.4
Abcd4O89016 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Abcd4O89016 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.52■□□□□ 0.4
Abcd4O89016 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Abcd4O89016 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Abcd4O89016 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Abcd4O89016 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Abcd4O89016 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Abcd4O89016 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Abcd4O89016 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Abcd4O89016 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.51■□□□□ 0.39
Abcd4O89016 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.51■□□□□ 0.39
Abcd4O89016 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
Abcd4O89016 Gm42569-201ENSMUST00000200539 472 ntBASIC17.51■□□□□ 0.39
Abcd4O89016 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Abcd4O89016 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Abcd4O89016 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Abcd4O89016 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
Abcd4O89016 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Abcd4O89016 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Abcd4O89016 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Abcd4O89016 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Abcd4O89016 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Abcd4O89016 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.5■□□□□ 0.39
Abcd4O89016 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Abcd4O89016 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Abcd4O89016 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Abcd4O89016 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Abcd4O89016 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.49■□□□□ 0.39
Abcd4O89016 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Abcd4O89016 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Abcd4O89016 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Abcd4O89016 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.49■□□□□ 0.39
Abcd4O89016 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Abcd4O89016 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Abcd4O89016 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Abcd4O89016 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Abcd4O89016 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Abcd4O89016 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Abcd4O89016 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Abcd4O89016 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Abcd4O89016 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Abcd4O89016 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Abcd4O89016 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Abcd4O89016 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Abcd4O89016 Gm18671-201ENSMUST00000214826 683 ntBASIC17.48■□□□□ 0.39
Abcd4O89016 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.48■□□□□ 0.39
Abcd4O89016 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Abcd4O89016 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Abcd4O89016 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Abcd4O89016 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Abcd4O89016 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Abcd4O89016 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.48■□□□□ 0.39
Abcd4O89016 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Abcd4O89016 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Abcd4O89016 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Abcd4O89016 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Abcd4O89016 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Abcd4O89016 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Abcd4O89016 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Abcd4O89016 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Abcd4O89016 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Abcd4O89016 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Abcd4O89016 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Abcd4O89016 Gm42642-201ENSMUST00000200683 355 ntBASIC17.47■□□□□ 0.39
Abcd4O89016 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Abcd4O89016 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Abcd4O89016 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Abcd4O89016 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Abcd4O89016 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Abcd4O89016 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.47■□□□□ 0.39
Abcd4O89016 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Abcd4O89016 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Abcd4O89016 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Abcd4O89016 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Abcd4O89016 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Abcd4O89016 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Abcd4O89016 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.46■□□□□ 0.39
Abcd4O89016 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Abcd4O89016 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Abcd4O89016 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.46■□□□□ 0.39
Abcd4O89016 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Abcd4O89016 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Abcd4O89016 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.46■□□□□ 0.39
Abcd4O89016 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abcd4O89016 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abcd4O89016 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abcd4O89016 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abcd4O89016 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abcd4O89016 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Abcd4O89016 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abcd4O89016 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abcd4O89016 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.44■□□□□ 0.38
Abcd4O89016 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abcd4O89016 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abcd4O89016 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abcd4O89016 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.44■□□□□ 0.38
Abcd4O89016 Gm7291-201ENSMUST00000199147 382 ntBASIC17.44■□□□□ 0.38
Abcd4O89016 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Abcd4O89016 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms