Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Syn1O88935 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Syn1O88935 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
Syn1O88935 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Syn1O88935 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Syn1O88935 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.11■□□□□ 0.81
Syn1O88935 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.11■□□□□ 0.81
Syn1O88935 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Syn1O88935 Gm27275-201ENSMUST00000184318 272 ntBASIC20.11■□□□□ 0.81
Syn1O88935 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Syn1O88935 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Syn1O88935 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Syn1O88935 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Syn1O88935 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Syn1O88935 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Syn1O88935 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Syn1O88935 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Syn1O88935 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.1■□□□□ 0.81
Syn1O88935 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Syn1O88935 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Syn1O88935 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Syn1O88935 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Syn1O88935 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.1■□□□□ 0.81
Syn1O88935 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Syn1O88935 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Syn1O88935 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Syn1O88935 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Syn1O88935 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Syn1O88935 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Syn1O88935 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Syn1O88935 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Syn1O88935 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.09■□□□□ 0.81
Syn1O88935 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Syn1O88935 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Syn1O88935 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Syn1O88935 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Syn1O88935 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Syn1O88935 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Syn1O88935 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Syn1O88935 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Syn1O88935 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Syn1O88935 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Syn1O88935 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Syn1O88935 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Syn1O88935 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.08■□□□□ 0.81
Syn1O88935 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.08■□□□□ 0.81
Syn1O88935 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Syn1O88935 Gm38205-201ENSMUST00000192243 258 ntBASIC20.08■□□□□ 0.81
Syn1O88935 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.08■□□□□ 0.81
Syn1O88935 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Syn1O88935 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Syn1O88935 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Syn1O88935 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Syn1O88935 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Syn1O88935 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Syn1O88935 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Syn1O88935 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Syn1O88935 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Syn1O88935 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Syn1O88935 Gm715-201ENSMUST00000117865 831 ntBASIC20.07■□□□□ 0.8
Syn1O88935 Gm15565-201ENSMUST00000118890 427 ntBASIC20.07■□□□□ 0.8
Syn1O88935 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.07■□□□□ 0.8
Syn1O88935 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Syn1O88935 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.07■□□□□ 0.8
Syn1O88935 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Syn1O88935 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Syn1O88935 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Syn1O88935 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Syn1O88935 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Syn1O88935 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.06■□□□□ 0.8
Syn1O88935 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Syn1O88935 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Syn1O88935 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Syn1O88935 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Syn1O88935 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Syn1O88935 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Syn1O88935 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Syn1O88935 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Syn1O88935 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Syn1O88935 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.05■□□□□ 0.8
Syn1O88935 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Syn1O88935 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Syn1O88935 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Syn1O88935 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Syn1O88935 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Syn1O88935 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Syn1O88935 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Syn1O88935 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Syn1O88935 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.04■□□□□ 0.8
Syn1O88935 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Syn1O88935 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Syn1O88935 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Syn1O88935 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Syn1O88935 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Syn1O88935 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.03■□□□□ 0.8
Syn1O88935 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Syn1O88935 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Syn1O88935 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Syn1O88935 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.03■□□□□ 0.8
Syn1O88935 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms