Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
ClppO88696 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ClppO88696 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
ClppO88696 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ClppO88696 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ClppO88696 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ClppO88696 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ClppO88696 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ClppO88696 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ClppO88696 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
ClppO88696 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.87■□□□□ 0.61
ClppO88696 Gm40848-201ENSMUST00000221998 324 ntBASIC18.87■□□□□ 0.61
ClppO88696 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ClppO88696 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ClppO88696 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ClppO88696 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
ClppO88696 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
ClppO88696 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ClppO88696 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ClppO88696 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ClppO88696 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ClppO88696 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.86■□□□□ 0.61
ClppO88696 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ClppO88696 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
ClppO88696 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ClppO88696 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
ClppO88696 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ClppO88696 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ClppO88696 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ClppO88696 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.85■□□□□ 0.61
ClppO88696 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ClppO88696 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
ClppO88696 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ClppO88696 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
ClppO88696 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ClppO88696 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ClppO88696 Gm11421-201ENSMUST00000122124 294 ntBASIC18.85■□□□□ 0.61
ClppO88696 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.85■□□□□ 0.61
ClppO88696 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.85■□□□□ 0.61
ClppO88696 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.85■□□□□ 0.61
ClppO88696 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.85■□□□□ 0.61
ClppO88696 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.85■□□□□ 0.61
ClppO88696 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ClppO88696 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.85■□□□□ 0.61
ClppO88696 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
ClppO88696 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ClppO88696 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ClppO88696 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.85■□□□□ 0.61
ClppO88696 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ClppO88696 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
ClppO88696 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ClppO88696 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.84■□□□□ 0.61
ClppO88696 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.84■□□□□ 0.61
ClppO88696 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ClppO88696 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ClppO88696 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ClppO88696 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ClppO88696 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ClppO88696 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.83■□□□□ 0.61
ClppO88696 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ClppO88696 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ClppO88696 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.83■□□□□ 0.6
ClppO88696 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
ClppO88696 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ClppO88696 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ClppO88696 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ClppO88696 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ClppO88696 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ClppO88696 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ClppO88696 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ClppO88696 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.82■□□□□ 0.6
ClppO88696 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.82■□□□□ 0.6
ClppO88696 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ClppO88696 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
ClppO88696 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ClppO88696 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ClppO88696 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.82■□□□□ 0.6
ClppO88696 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ClppO88696 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ClppO88696 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ClppO88696 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ClppO88696 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ClppO88696 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ClppO88696 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ClppO88696 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ClppO88696 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ClppO88696 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ClppO88696 Gm10849-201ENSMUST00000100397 618 ntBASIC18.81■□□□□ 0.6
ClppO88696 Gm42642-201ENSMUST00000200683 355 ntBASIC18.81■□□□□ 0.6
ClppO88696 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ClppO88696 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ClppO88696 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ClppO88696 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ClppO88696 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ClppO88696 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ClppO88696 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ClppO88696 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ClppO88696 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ClppO88696 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ClppO88696 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms