Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tgfbr3O88393 Gm7290-201ENSMUST00000104990 617 ntBASIC18.57■□□□□ 0.56
Tgfbr3O88393 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Tgfbr3O88393 Gm12918-201ENSMUST00000120234 636 ntBASIC18.57■□□□□ 0.56
Tgfbr3O88393 Gm15710-201ENSMUST00000121821 636 ntBASIC18.57■□□□□ 0.56
Tgfbr3O88393 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.57■□□□□ 0.56
Tgfbr3O88393 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.57■□□□□ 0.56
Tgfbr3O88393 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.57■□□□□ 0.56
Tgfbr3O88393 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.57■□□□□ 0.56
Tgfbr3O88393 Gm6420-201ENSMUST00000193885 723 ntBASIC18.57■□□□□ 0.56
Tgfbr3O88393 Gm5075-201ENSMUST00000196916 622 ntBASIC18.57■□□□□ 0.56
Tgfbr3O88393 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.57■□□□□ 0.56
Tgfbr3O88393 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.57■□□□□ 0.56
Tgfbr3O88393 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.57■□□□□ 0.56
Tgfbr3O88393 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tgfbr3O88393 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tgfbr3O88393 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tgfbr3O88393 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tgfbr3O88393 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tgfbr3O88393 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tgfbr3O88393 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tgfbr3O88393 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tgfbr3O88393 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Tgfbr3O88393 Gm20760-201ENSMUST00000179197 648 ntBASIC18.56■□□□□ 0.56
Tgfbr3O88393 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Tgfbr3O88393 Gm5408-201ENSMUST00000197998 747 ntBASIC18.56■□□□□ 0.56
Tgfbr3O88393 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Tgfbr3O88393 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tgfbr3O88393 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tgfbr3O88393 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tgfbr3O88393 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Tgfbr3O88393 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.56■□□□□ 0.56
Tgfbr3O88393 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tgfbr3O88393 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tgfbr3O88393 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.55■□□□□ 0.56
Tgfbr3O88393 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Tgfbr3O88393 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tgfbr3O88393 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Tgfbr3O88393 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tgfbr3O88393 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Tgfbr3O88393 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tgfbr3O88393 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tgfbr3O88393 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tgfbr3O88393 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tgfbr3O88393 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tgfbr3O88393 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tgfbr3O88393 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tgfbr3O88393 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.54■□□□□ 0.56
Tgfbr3O88393 Gm22240-201ENSMUST00000175225 82 ntBASIC18.54■□□□□ 0.56
Tgfbr3O88393 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tgfbr3O88393 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.54■□□□□ 0.56
Tgfbr3O88393 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Tgfbr3O88393 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tgfbr3O88393 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Tgfbr3O88393 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Tgfbr3O88393 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Tgfbr3O88393 Gm13534-201ENSMUST00000121169 513 ntBASIC18.53■□□□□ 0.56
Tgfbr3O88393 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.53■□□□□ 0.56
Tgfbr3O88393 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tgfbr3O88393 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tgfbr3O88393 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tgfbr3O88393 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Tgfbr3O88393 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.53■□□□□ 0.56
Tgfbr3O88393 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tgfbr3O88393 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Tgfbr3O88393 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tgfbr3O88393 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tgfbr3O88393 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tgfbr3O88393 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tgfbr3O88393 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tgfbr3O88393 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tgfbr3O88393 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.52■□□□□ 0.56
Tgfbr3O88393 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.52■□□□□ 0.56
Tgfbr3O88393 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.52■□□□□ 0.56
Tgfbr3O88393 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tgfbr3O88393 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Tgfbr3O88393 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Tgfbr3O88393 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Tgfbr3O88393 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.52■□□□□ 0.56
Tgfbr3O88393 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tgfbr3O88393 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Tgfbr3O88393 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tgfbr3O88393 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tgfbr3O88393 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.52■□□□□ 0.55
Tgfbr3O88393 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tgfbr3O88393 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tgfbr3O88393 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.51■□□□□ 0.55
Tgfbr3O88393 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tgfbr3O88393 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.51■□□□□ 0.55
Tgfbr3O88393 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tgfbr3O88393 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Tgfbr3O88393 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tgfbr3O88393 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tgfbr3O88393 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tgfbr3O88393 AA386476-201ENSMUST00000098781 1665 ntBASIC18.5■□□□□ 0.55
Tgfbr3O88393 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tgfbr3O88393 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tgfbr3O88393 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Tgfbr3O88393 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tgfbr3O88393 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms