Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cdh16O88338 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.02■□□□□ 0.63
Cdh16O88338 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cdh16O88338 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdh16O88338 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdh16O88338 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Cdh16O88338 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cdh16O88338 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdh16O88338 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdh16O88338 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdh16O88338 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdh16O88338 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdh16O88338 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdh16O88338 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cdh16O88338 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdh16O88338 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdh16O88338 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cdh16O88338 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdh16O88338 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Cdh16O88338 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdh16O88338 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdh16O88338 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Cdh16O88338 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19■□□□□ 0.63
Cdh16O88338 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19■□□□□ 0.63
Cdh16O88338 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Cdh16O88338 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cdh16O88338 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdh16O88338 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdh16O88338 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdh16O88338 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdh16O88338 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdh16O88338 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdh16O88338 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdh16O88338 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdh16O88338 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Cdh16O88338 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Cdh16O88338 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.99■□□□□ 0.63
Cdh16O88338 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdh16O88338 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdh16O88338 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdh16O88338 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdh16O88338 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdh16O88338 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdh16O88338 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cdh16O88338 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdh16O88338 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.98■□□□□ 0.63
Cdh16O88338 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.98■□□□□ 0.63
Cdh16O88338 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cdh16O88338 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdh16O88338 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdh16O88338 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdh16O88338 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cdh16O88338 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdh16O88338 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdh16O88338 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdh16O88338 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdh16O88338 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.97■□□□□ 0.63
Cdh16O88338 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdh16O88338 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Cdh16O88338 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.97■□□□□ 0.63
Cdh16O88338 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cdh16O88338 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdh16O88338 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.97■□□□□ 0.63
Cdh16O88338 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdh16O88338 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdh16O88338 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.96■□□□□ 0.63
Cdh16O88338 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdh16O88338 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.96■□□□□ 0.63
Cdh16O88338 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdh16O88338 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Cdh16O88338 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cdh16O88338 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.96■□□□□ 0.63
Cdh16O88338 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdh16O88338 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.95■□□□□ 0.62
Cdh16O88338 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.95■□□□□ 0.62
Cdh16O88338 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.95■□□□□ 0.62
Cdh16O88338 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.95■□□□□ 0.62
Cdh16O88338 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdh16O88338 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdh16O88338 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.95■□□□□ 0.62
Cdh16O88338 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
Cdh16O88338 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdh16O88338 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdh16O88338 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdh16O88338 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdh16O88338 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdh16O88338 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.94■□□□□ 0.62
Cdh16O88338 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.94■□□□□ 0.62
Cdh16O88338 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdh16O88338 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdh16O88338 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Cdh16O88338 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Cdh16O88338 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Cdh16O88338 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdh16O88338 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Cdh16O88338 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cdh16O88338 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Cdh16O88338 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdh16O88338 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.93■□□□□ 0.62
Cdh16O88338 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms