Protein–RNA interactions for Protein: O55241

Hcrt, Orexin, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HcrtO55241 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HcrtO55241 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.46■□□□□ 0.71
HcrtO55241 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.46■□□□□ 0.71
HcrtO55241 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
HcrtO55241 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.46■□□□□ 0.71
HcrtO55241 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HcrtO55241 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
HcrtO55241 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HcrtO55241 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HcrtO55241 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HcrtO55241 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.45■□□□□ 0.7
HcrtO55241 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.45■□□□□ 0.7
HcrtO55241 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HcrtO55241 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HcrtO55241 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HcrtO55241 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HcrtO55241 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HcrtO55241 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HcrtO55241 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HcrtO55241 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HcrtO55241 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HcrtO55241 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
HcrtO55241 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HcrtO55241 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HcrtO55241 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.44■□□□□ 0.7
HcrtO55241 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
HcrtO55241 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.44■□□□□ 0.7
HcrtO55241 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HcrtO55241 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HcrtO55241 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HcrtO55241 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
HcrtO55241 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HcrtO55241 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HcrtO55241 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HcrtO55241 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
HcrtO55241 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HcrtO55241 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.43■□□□□ 0.7
HcrtO55241 Gm43173-201ENSMUST00000202246 593 ntBASIC19.43■□□□□ 0.7
HcrtO55241 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HcrtO55241 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
HcrtO55241 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.43■□□□□ 0.7
HcrtO55241 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.43■□□□□ 0.7
HcrtO55241 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HcrtO55241 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HcrtO55241 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HcrtO55241 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HcrtO55241 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HcrtO55241 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HcrtO55241 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.42■□□□□ 0.7
HcrtO55241 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HcrtO55241 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HcrtO55241 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HcrtO55241 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HcrtO55241 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HcrtO55241 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
HcrtO55241 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HcrtO55241 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.41■□□□□ 0.7
HcrtO55241 Gm12821-201ENSMUST00000120022 600 ntBASIC19.41■□□□□ 0.7
HcrtO55241 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.41■□□□□ 0.7
HcrtO55241 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HcrtO55241 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HcrtO55241 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HcrtO55241 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
HcrtO55241 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HcrtO55241 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HcrtO55241 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HcrtO55241 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HcrtO55241 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HcrtO55241 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HcrtO55241 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HcrtO55241 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.4■□□□□ 0.7
HcrtO55241 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HcrtO55241 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HcrtO55241 Gm6139-201ENSMUST00000079261 882 ntBASIC19.4■□□□□ 0.7
HcrtO55241 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HcrtO55241 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HcrtO55241 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HcrtO55241 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
HcrtO55241 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HcrtO55241 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
HcrtO55241 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
HcrtO55241 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
HcrtO55241 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
HcrtO55241 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HcrtO55241 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
HcrtO55241 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HcrtO55241 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
HcrtO55241 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HcrtO55241 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HcrtO55241 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HcrtO55241 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HcrtO55241 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HcrtO55241 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.39■□□□□ 0.69
HcrtO55241 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
HcrtO55241 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
HcrtO55241 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HcrtO55241 Gm8493-201ENSMUST00000196881 489 ntBASIC19.38■□□□□ 0.69
HcrtO55241 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HcrtO55241 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HcrtO55241 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms