Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pja1O55176 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pja1O55176 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pja1O55176 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pja1O55176 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pja1O55176 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pja1O55176 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pja1O55176 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Pja1O55176 Gm22238-201ENSMUST00000175222 88 ntBASIC20.56■□□□□ 0.88
Pja1O55176 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Pja1O55176 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.56■□□□□ 0.88
Pja1O55176 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.56■□□□□ 0.88
Pja1O55176 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pja1O55176 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pja1O55176 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pja1O55176 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pja1O55176 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pja1O55176 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pja1O55176 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Pja1O55176 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pja1O55176 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Pja1O55176 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Pja1O55176 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pja1O55176 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pja1O55176 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pja1O55176 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pja1O55176 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pja1O55176 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pja1O55176 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.55■□□□□ 0.88
Pja1O55176 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pja1O55176 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pja1O55176 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pja1O55176 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pja1O55176 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Pja1O55176 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pja1O55176 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pja1O55176 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Pja1O55176 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pja1O55176 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pja1O55176 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pja1O55176 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pja1O55176 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pja1O55176 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pja1O55176 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Pja1O55176 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pja1O55176 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pja1O55176 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pja1O55176 Gm15546-201ENSMUST00000122095 826 ntBASIC20.53■□□□□ 0.88
Pja1O55176 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.53■□□□□ 0.88
Pja1O55176 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pja1O55176 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pja1O55176 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Pja1O55176 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pja1O55176 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pja1O55176 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.52■□□□□ 0.88
Pja1O55176 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.52■□□□□ 0.88
Pja1O55176 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.52■□□□□ 0.88
Pja1O55176 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pja1O55176 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pja1O55176 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pja1O55176 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pja1O55176 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pja1O55176 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pja1O55176 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pja1O55176 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pja1O55176 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.51■□□□□ 0.87
Pja1O55176 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pja1O55176 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pja1O55176 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.51■□□□□ 0.87
Pja1O55176 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.51■□□□□ 0.87
Pja1O55176 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pja1O55176 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pja1O55176 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pja1O55176 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pja1O55176 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Pja1O55176 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Pja1O55176 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pja1O55176 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pja1O55176 Gm9959-201ENSMUST00000068277 390 ntBASIC20.5■□□□□ 0.87
Pja1O55176 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pja1O55176 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Pja1O55176 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Pja1O55176 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pja1O55176 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.5■□□□□ 0.87
Pja1O55176 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Pja1O55176 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pja1O55176 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.49■□□□□ 0.87
Pja1O55176 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.49■□□□□ 0.87
Pja1O55176 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pja1O55176 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Pja1O55176 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pja1O55176 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pja1O55176 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pja1O55176 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.49■□□□□ 0.87
Pja1O55176 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pja1O55176 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pja1O55176 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pja1O55176 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Pja1O55176 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pja1O55176 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms