Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpl35aO55142 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rpl35aO55142 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Rpl35aO55142 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Rpl35aO55142 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Rpl35aO55142 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Rpl35aO55142 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rpl35aO55142 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rpl35aO55142 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rpl35aO55142 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rpl35aO55142 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rpl35aO55142 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Rpl35aO55142 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rpl35aO55142 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rpl35aO55142 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rpl35aO55142 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rpl35aO55142 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rpl35aO55142 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rpl35aO55142 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rpl35aO55142 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Rpl35aO55142 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rpl35aO55142 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Rpl35aO55142 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rpl35aO55142 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpl35aO55142 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpl35aO55142 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC14.45□□□□□ -0.1
Rpl35aO55142 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpl35aO55142 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpl35aO55142 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpl35aO55142 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Rpl35aO55142 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC14.45□□□□□ -0.1
Rpl35aO55142 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC14.45□□□□□ -0.1
Rpl35aO55142 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpl35aO55142 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpl35aO55142 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpl35aO55142 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpl35aO55142 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Rpl35aO55142 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpl35aO55142 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpl35aO55142 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.44□□□□□ -0.1
Rpl35aO55142 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rpl35aO55142 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rpl35aO55142 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Rpl35aO55142 Cdc34b-202ENSMUST00000188741 1252 ntBASIC14.44□□□□□ -0.1
Rpl35aO55142 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpl35aO55142 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Rpl35aO55142 AC165080.2-201ENSMUST00000217491 1530 ntBASIC14.44□□□□□ -0.1
Rpl35aO55142 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpl35aO55142 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpl35aO55142 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpl35aO55142 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Rpl35aO55142 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpl35aO55142 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Rpl35aO55142 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpl35aO55142 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpl35aO55142 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC14.43□□□□□ -0.1
Rpl35aO55142 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpl35aO55142 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rpl35aO55142 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Rpl35aO55142 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpl35aO55142 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
Rpl35aO55142 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpl35aO55142 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rpl35aO55142 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
Rpl35aO55142 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC14.43□□□□□ -0.1
Rpl35aO55142 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpl35aO55142 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpl35aO55142 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC14.43□□□□□ -0.1
Rpl35aO55142 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.43□□□□□ -0.1
Rpl35aO55142 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Rpl35aO55142 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpl35aO55142 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpl35aO55142 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpl35aO55142 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpl35aO55142 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC14.42□□□□□ -0.1
Rpl35aO55142 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpl35aO55142 Gm11421-201ENSMUST00000122124 294 ntBASIC14.42□□□□□ -0.1
Rpl35aO55142 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC14.42□□□□□ -0.1
Rpl35aO55142 Smad6-203ENSMUST00000179458 273 ntBASIC14.42□□□□□ -0.1
Rpl35aO55142 Gm43060-201ENSMUST00000200621 289 ntBASIC14.42□□□□□ -0.1
Rpl35aO55142 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Rpl35aO55142 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Rpl35aO55142 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpl35aO55142 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpl35aO55142 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rpl35aO55142 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpl35aO55142 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpl35aO55142 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpl35aO55142 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpl35aO55142 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpl35aO55142 AC152827.1-201ENSMUST00000221143 2189 ntBASIC14.41□□□□□ -0.1
Rpl35aO55142 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl35aO55142 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl35aO55142 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Rpl35aO55142 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC14.41□□□□□ -0.1
Rpl35aO55142 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl35aO55142 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl35aO55142 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl35aO55142 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Rpl35aO55142 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms