Protein–RNA interactions for Protein: O55134

Pcdh12, Protocadherin-12, mousemouse

Predictions only

Length 1,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh12O55134 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.63■□□□□ 0.41
Pcdh12O55134 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh12O55134 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh12O55134 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.62■□□□□ 0.41
Pcdh12O55134 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh12O55134 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh12O55134 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Pcdh12O55134 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh12O55134 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.62■□□□□ 0.41
Pcdh12O55134 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh12O55134 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh12O55134 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.62■□□□□ 0.41
Pcdh12O55134 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh12O55134 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh12O55134 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh12O55134 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh12O55134 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh12O55134 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh12O55134 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Pcdh12O55134 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh12O55134 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Pcdh12O55134 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh12O55134 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh12O55134 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh12O55134 Gm8493-201ENSMUST00000196881 489 ntBASIC17.61■□□□□ 0.41
Pcdh12O55134 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh12O55134 Spcs1-204ENSMUST00000226782 949 ntBASIC17.61■□□□□ 0.41
Pcdh12O55134 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh12O55134 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Pcdh12O55134 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh12O55134 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh12O55134 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Pcdh12O55134 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.6■□□□□ 0.41
Pcdh12O55134 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh12O55134 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh12O55134 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh12O55134 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh12O55134 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh12O55134 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh12O55134 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh12O55134 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh12O55134 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.59■□□□□ 0.41
Pcdh12O55134 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.59■□□□□ 0.41
Pcdh12O55134 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh12O55134 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh12O55134 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh12O55134 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.59■□□□□ 0.41
Pcdh12O55134 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdh12O55134 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdh12O55134 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdh12O55134 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Pcdh12O55134 Gm12251-201ENSMUST00000117893 792 ntBASIC17.58■□□□□ 0.4
Pcdh12O55134 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.58■□□□□ 0.4
Pcdh12O55134 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh12O55134 Serp2-204ENSMUST00000228055 705 ntBASIC17.58■□□□□ 0.4
Pcdh12O55134 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh12O55134 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh12O55134 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Pcdh12O55134 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh12O55134 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh12O55134 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh12O55134 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh12O55134 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.57■□□□□ 0.4
Pcdh12O55134 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.57■□□□□ 0.4
Pcdh12O55134 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.57■□□□□ 0.4
Pcdh12O55134 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Pcdh12O55134 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Pcdh12O55134 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh12O55134 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Pcdh12O55134 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh12O55134 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.56■□□□□ 0.4
Pcdh12O55134 Gm43173-201ENSMUST00000202246 593 ntBASIC17.56■□□□□ 0.4
Pcdh12O55134 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh12O55134 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh12O55134 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Pcdh12O55134 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh12O55134 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh12O55134 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh12O55134 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.55■□□□□ 0.4
Pcdh12O55134 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Pcdh12O55134 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh12O55134 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.55■□□□□ 0.4
Pcdh12O55134 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.55■□□□□ 0.4
Pcdh12O55134 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Pcdh12O55134 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.55■□□□□ 0.4
Pcdh12O55134 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh12O55134 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.55■□□□□ 0.4
Pcdh12O55134 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh12O55134 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh12O55134 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh12O55134 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh12O55134 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh12O55134 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Pcdh12O55134 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.54■□□□□ 0.4
Pcdh12O55134 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.54■□□□□ 0.4
Pcdh12O55134 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh12O55134 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh12O55134 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh12O55134 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Pcdh12O55134 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms