Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Cldn5O54942 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cldn5O54942 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn5O54942 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn5O54942 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn5O54942 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn5O54942 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Cldn5O54942 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn5O54942 Gm42778-201ENSMUST00000199644 553 ntBASIC20.27■□□□□ 0.84
Cldn5O54942 Gm10033-202ENSMUST00000211874 928 ntBASIC20.27■□□□□ 0.84
Cldn5O54942 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn5O54942 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Cldn5O54942 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Cldn5O54942 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn5O54942 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn5O54942 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Cldn5O54942 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn5O54942 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn5O54942 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn5O54942 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn5O54942 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn5O54942 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Cldn5O54942 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn5O54942 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn5O54942 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn5O54942 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn5O54942 Reep4-203ENSMUST00000226563 1444 ntBASIC20.26■□□□□ 0.83
Cldn5O54942 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn5O54942 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn5O54942 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn5O54942 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn5O54942 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn5O54942 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn5O54942 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn5O54942 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn5O54942 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Cldn5O54942 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn5O54942 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.25■□□□□ 0.83
Cldn5O54942 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.25■□□□□ 0.83
Cldn5O54942 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.25■□□□□ 0.83
Cldn5O54942 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn5O54942 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn5O54942 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn5O54942 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.24■□□□□ 0.83
Cldn5O54942 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Cldn5O54942 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Cldn5O54942 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.24■□□□□ 0.83
Cldn5O54942 Gm18671-201ENSMUST00000214826 683 ntBASIC20.24■□□□□ 0.83
Cldn5O54942 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cldn5O54942 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cldn5O54942 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cldn5O54942 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.24■□□□□ 0.83
Cldn5O54942 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cldn5O54942 Gm10849-201ENSMUST00000100397 618 ntBASIC20.23■□□□□ 0.83
Cldn5O54942 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cldn5O54942 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cldn5O54942 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cldn5O54942 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cldn5O54942 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cldn5O54942 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cldn5O54942 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cldn5O54942 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cldn5O54942 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cldn5O54942 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cldn5O54942 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cldn5O54942 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cldn5O54942 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.22■□□□□ 0.83
Cldn5O54942 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Cldn5O54942 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cldn5O54942 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Cldn5O54942 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.22■□□□□ 0.83
Cldn5O54942 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Cldn5O54942 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cldn5O54942 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Cldn5O54942 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cldn5O54942 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cldn5O54942 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cldn5O54942 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Cldn5O54942 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cldn5O54942 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cldn5O54942 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cldn5O54942 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cldn5O54942 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cldn5O54942 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.21■□□□□ 0.83
Cldn5O54942 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cldn5O54942 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cldn5O54942 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cldn5O54942 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.21■□□□□ 0.83
Cldn5O54942 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Cldn5O54942 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Cldn5O54942 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cldn5O54942 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cldn5O54942 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cldn5O54942 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cldn5O54942 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Cldn5O54942 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cldn5O54942 Gm7291-201ENSMUST00000199147 382 ntBASIC20.2■□□□□ 0.82
Cldn5O54942 AV356131-201ENSMUST00000206201 750 ntBASIC20.2■□□□□ 0.82
Cldn5O54942 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Cldn5O54942 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms