Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Itgb3O54890 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Itgb3O54890 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Itgb3O54890 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Itgb3O54890 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.68■□□□□ 0.9
Itgb3O54890 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Itgb3O54890 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Itgb3O54890 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Itgb3O54890 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.68■□□□□ 0.9
Itgb3O54890 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Itgb3O54890 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Itgb3O54890 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Itgb3O54890 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Itgb3O54890 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Itgb3O54890 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Itgb3O54890 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Itgb3O54890 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.67■□□□□ 0.9
Itgb3O54890 Gm9988-201ENSMUST00000069786 435 ntBASIC20.67■□□□□ 0.9
Itgb3O54890 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Itgb3O54890 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Itgb3O54890 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.67■□□□□ 0.9
Itgb3O54890 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.67■□□□□ 0.9
Itgb3O54890 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Itgb3O54890 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Itgb3O54890 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Itgb3O54890 Gm42642-201ENSMUST00000200683 355 ntBASIC20.66■□□□□ 0.9
Itgb3O54890 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Itgb3O54890 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Itgb3O54890 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Itgb3O54890 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Itgb3O54890 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Itgb3O54890 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Itgb3O54890 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Itgb3O54890 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Itgb3O54890 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Itgb3O54890 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Itgb3O54890 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Itgb3O54890 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.65■□□□□ 0.9
Itgb3O54890 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
Itgb3O54890 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Itgb3O54890 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Itgb3O54890 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Itgb3O54890 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
Itgb3O54890 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Itgb3O54890 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Itgb3O54890 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Itgb3O54890 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Itgb3O54890 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Itgb3O54890 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.64■□□□□ 0.89
Itgb3O54890 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Itgb3O54890 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Itgb3O54890 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.63■□□□□ 0.89
Itgb3O54890 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Itgb3O54890 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Itgb3O54890 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.63■□□□□ 0.89
Itgb3O54890 Gm26571-201ENSMUST00000181399 666 ntBASIC20.63■□□□□ 0.89
Itgb3O54890 Gm42778-201ENSMUST00000199644 553 ntBASIC20.63■□□□□ 0.89
Itgb3O54890 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Itgb3O54890 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Itgb3O54890 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Itgb3O54890 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Itgb3O54890 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Itgb3O54890 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Itgb3O54890 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Itgb3O54890 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Itgb3O54890 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.62■□□□□ 0.89
Itgb3O54890 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Itgb3O54890 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Itgb3O54890 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Itgb3O54890 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Itgb3O54890 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Itgb3O54890 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Itgb3O54890 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Itgb3O54890 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.62■□□□□ 0.89
Itgb3O54890 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.62■□□□□ 0.89
Itgb3O54890 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Itgb3O54890 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Itgb3O54890 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Itgb3O54890 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Itgb3O54890 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.62■□□□□ 0.89
Itgb3O54890 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Itgb3O54890 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Itgb3O54890 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Itgb3O54890 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Itgb3O54890 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Itgb3O54890 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.61■□□□□ 0.89
Itgb3O54890 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.61■□□□□ 0.89
Itgb3O54890 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Itgb3O54890 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Itgb3O54890 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Itgb3O54890 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Itgb3O54890 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Itgb3O54890 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Itgb3O54890 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Itgb3O54890 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Itgb3O54890 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Itgb3O54890 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.6■□□□□ 0.89
Itgb3O54890 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.6■□□□□ 0.89
Itgb3O54890 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Itgb3O54890 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms