Protein–RNA interactions for Protein: O35902

Dsg3, Desmoglein-3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dsg3O35902 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Dsg3O35902 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.8■□□□□ 0.92
Dsg3O35902 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Dsg3O35902 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Dsg3O35902 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Dsg3O35902 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.8■□□□□ 0.92
Dsg3O35902 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.8■□□□□ 0.92
Dsg3O35902 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Dsg3O35902 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Dsg3O35902 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Dsg3O35902 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Dsg3O35902 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Dsg3O35902 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
Dsg3O35902 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Dsg3O35902 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Dsg3O35902 Gm27801-201ENSMUST00000184174 223 ntBASIC20.79■□□□□ 0.92
Dsg3O35902 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.79■□□□□ 0.92
Dsg3O35902 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Dsg3O35902 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.78■□□□□ 0.92
Dsg3O35902 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Dsg3O35902 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Dsg3O35902 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Dsg3O35902 Mir5133-201ENSMUST00000174955 77 ntBASIC20.78■□□□□ 0.92
Dsg3O35902 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Dsg3O35902 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Dsg3O35902 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Dsg3O35902 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Dsg3O35902 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Dsg3O35902 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Dsg3O35902 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Dsg3O35902 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Dsg3O35902 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Dsg3O35902 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
Dsg3O35902 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Dsg3O35902 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Dsg3O35902 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Dsg3O35902 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Dsg3O35902 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Dsg3O35902 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Dsg3O35902 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Dsg3O35902 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Dsg3O35902 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Dsg3O35902 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.75■□□□□ 0.91
Dsg3O35902 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.75■□□□□ 0.91
Dsg3O35902 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Dsg3O35902 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Dsg3O35902 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Dsg3O35902 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Dsg3O35902 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Dsg3O35902 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Dsg3O35902 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Dsg3O35902 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Dsg3O35902 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Dsg3O35902 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Dsg3O35902 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.74■□□□□ 0.91
Dsg3O35902 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Dsg3O35902 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Dsg3O35902 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Dsg3O35902 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Dsg3O35902 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Dsg3O35902 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Dsg3O35902 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Dsg3O35902 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Dsg3O35902 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Dsg3O35902 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Dsg3O35902 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Dsg3O35902 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Dsg3O35902 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.73■□□□□ 0.91
Dsg3O35902 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Dsg3O35902 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
Dsg3O35902 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Dsg3O35902 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Dsg3O35902 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.73■□□□□ 0.91
Dsg3O35902 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Dsg3O35902 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Dsg3O35902 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Dsg3O35902 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Dsg3O35902 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Dsg3O35902 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Dsg3O35902 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.72■□□□□ 0.91
Dsg3O35902 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Dsg3O35902 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.72■□□□□ 0.91
Dsg3O35902 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.72■□□□□ 0.91
Dsg3O35902 Gm4968-201ENSMUST00000071458 858 ntBASIC20.72■□□□□ 0.91
Dsg3O35902 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Dsg3O35902 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Dsg3O35902 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
Dsg3O35902 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Dsg3O35902 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Dsg3O35902 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Dsg3O35902 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Dsg3O35902 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Dsg3O35902 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Dsg3O35902 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.71■□□□□ 0.91
Dsg3O35902 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.71■□□□□ 0.91
Dsg3O35902 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Dsg3O35902 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Dsg3O35902 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Dsg3O35902 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Dsg3O35902 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms