Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Clk2O35491 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC21.27■■□□□ 1
Clk2O35491 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Clk2O35491 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Clk2O35491 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Clk2O35491 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Clk2O35491 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Clk2O35491 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Clk2O35491 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Clk2O35491 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Clk2O35491 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Clk2O35491 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.26■□□□□ 0.99
Clk2O35491 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.26■□□□□ 0.99
Clk2O35491 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Clk2O35491 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Clk2O35491 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Clk2O35491 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21.25■□□□□ 0.99
Clk2O35491 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Clk2O35491 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Clk2O35491 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Clk2O35491 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.24■□□□□ 0.99
Clk2O35491 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Clk2O35491 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Clk2O35491 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC21.24■□□□□ 0.99
Clk2O35491 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Clk2O35491 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Clk2O35491 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.24■□□□□ 0.99
Clk2O35491 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Clk2O35491 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.24■□□□□ 0.99
Clk2O35491 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clk2O35491 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.23■□□□□ 0.99
Clk2O35491 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clk2O35491 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Clk2O35491 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Clk2O35491 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.23■□□□□ 0.99
Clk2O35491 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Clk2O35491 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.23■□□□□ 0.99
Clk2O35491 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Clk2O35491 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clk2O35491 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Clk2O35491 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clk2O35491 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Clk2O35491 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clk2O35491 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clk2O35491 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clk2O35491 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clk2O35491 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clk2O35491 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clk2O35491 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Clk2O35491 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clk2O35491 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clk2O35491 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clk2O35491 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Clk2O35491 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.22■□□□□ 0.99
Clk2O35491 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC21.22■□□□□ 0.99
Clk2O35491 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clk2O35491 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clk2O35491 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Clk2O35491 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Clk2O35491 Gm13146-201ENSMUST00000118508 780 ntBASIC21.21■□□□□ 0.99
Clk2O35491 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Clk2O35491 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clk2O35491 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC21.21■□□□□ 0.99
Clk2O35491 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clk2O35491 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clk2O35491 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Clk2O35491 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Clk2O35491 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Clk2O35491 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Clk2O35491 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.2■□□□□ 0.98
Clk2O35491 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Clk2O35491 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.2■□□□□ 0.98
Clk2O35491 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Clk2O35491 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.2■□□□□ 0.98
Clk2O35491 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Clk2O35491 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clk2O35491 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.19■□□□□ 0.98
Clk2O35491 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clk2O35491 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clk2O35491 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clk2O35491 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clk2O35491 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Clk2O35491 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.19■□□□□ 0.98
Clk2O35491 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Clk2O35491 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Clk2O35491 Gm38205-201ENSMUST00000192243 258 ntBASIC21.19■□□□□ 0.98
Clk2O35491 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.19■□□□□ 0.98
Clk2O35491 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Clk2O35491 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21.19■□□□□ 0.98
Clk2O35491 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Clk2O35491 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clk2O35491 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Clk2O35491 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Clk2O35491 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Clk2O35491 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Clk2O35491 CT010467.1-202ENSMUST00000205406 714 ntBASIC21.18■□□□□ 0.98
Clk2O35491 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clk2O35491 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.18■□□□□ 0.98
Clk2O35491 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC21.18■□□□□ 0.98
Clk2O35491 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms