Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf2O35218 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf2O35218 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf2O35218 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf2O35218 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpsf2O35218 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpsf2O35218 Rps24-207ENSMUST00000224568 714 ntBASIC20.71■□□□□ 0.91
Cpsf2O35218 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Cpsf2O35218 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpsf2O35218 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cpsf2O35218 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Cpsf2O35218 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.7■□□□□ 0.9
Cpsf2O35218 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf2O35218 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf2O35218 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf2O35218 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf2O35218 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf2O35218 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.7■□□□□ 0.9
Cpsf2O35218 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf2O35218 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf2O35218 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf2O35218 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf2O35218 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf2O35218 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.69■□□□□ 0.9
Cpsf2O35218 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf2O35218 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf2O35218 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.68■□□□□ 0.9
Cpsf2O35218 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf2O35218 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf2O35218 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf2O35218 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf2O35218 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.68■□□□□ 0.9
Cpsf2O35218 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Cpsf2O35218 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf2O35218 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf2O35218 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf2O35218 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf2O35218 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf2O35218 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Cpsf2O35218 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf2O35218 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf2O35218 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf2O35218 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Cpsf2O35218 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf2O35218 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf2O35218 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf2O35218 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf2O35218 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf2O35218 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.67■□□□□ 0.9
Cpsf2O35218 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Cpsf2O35218 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.67■□□□□ 0.9
Cpsf2O35218 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf2O35218 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.67■□□□□ 0.9
Cpsf2O35218 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf2O35218 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf2O35218 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.66■□□□□ 0.9
Cpsf2O35218 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf2O35218 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf2O35218 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf2O35218 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf2O35218 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf2O35218 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf2O35218 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cpsf2O35218 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.65■□□□□ 0.9
Cpsf2O35218 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.65■□□□□ 0.9
Cpsf2O35218 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpsf2O35218 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Cpsf2O35218 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpsf2O35218 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpsf2O35218 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpsf2O35218 AA386476-201ENSMUST00000098781 1665 ntBASIC20.64■□□□□ 0.9
Cpsf2O35218 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cpsf2O35218 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cpsf2O35218 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cpsf2O35218 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cpsf2O35218 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cpsf2O35218 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Cpsf2O35218 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cpsf2O35218 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Cpsf2O35218 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cpsf2O35218 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Cpsf2O35218 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cpsf2O35218 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpsf2O35218 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.63■□□□□ 0.89
Cpsf2O35218 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpsf2O35218 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.63■□□□□ 0.89
Cpsf2O35218 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cpsf2O35218 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpsf2O35218 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpsf2O35218 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpsf2O35218 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpsf2O35218 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpsf2O35218 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpsf2O35218 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpsf2O35218 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cpsf2O35218 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cpsf2O35218 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Cpsf2O35218 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.62■□□□□ 0.89
Cpsf2O35218 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.62■□□□□ 0.89
Cpsf2O35218 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms