Protein–RNA interactions for Protein: O09126

Sema4d, Semaphorin-4D, mousemouse

Predictions only

Length 861 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema4dO09126 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sema4dO09126 AA386476-201ENSMUST00000098781 1665 ntBASIC21.12■□□□□ 0.97
Sema4dO09126 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sema4dO09126 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sema4dO09126 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sema4dO09126 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sema4dO09126 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sema4dO09126 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Sema4dO09126 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sema4dO09126 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Sema4dO09126 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sema4dO09126 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sema4dO09126 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Sema4dO09126 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Sema4dO09126 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sema4dO09126 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Sema4dO09126 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sema4dO09126 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.1■□□□□ 0.97
Sema4dO09126 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Sema4dO09126 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Sema4dO09126 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Sema4dO09126 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sema4dO09126 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sema4dO09126 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sema4dO09126 Iqck-206ENSMUST00000208658 2891 ntBASIC21.09■□□□□ 0.97
Sema4dO09126 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sema4dO09126 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.09■□□□□ 0.97
Sema4dO09126 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Sema4dO09126 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.09■□□□□ 0.97
Sema4dO09126 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sema4dO09126 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sema4dO09126 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
Sema4dO09126 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.09■□□□□ 0.97
Sema4dO09126 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Sema4dO09126 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sema4dO09126 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sema4dO09126 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sema4dO09126 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sema4dO09126 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sema4dO09126 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Sema4dO09126 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.07■□□□□ 0.96
Sema4dO09126 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sema4dO09126 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sema4dO09126 Gm43017-201ENSMUST00000198296 752 ntBASIC21.07■□□□□ 0.96
Sema4dO09126 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Sema4dO09126 Serp2-204ENSMUST00000228055 705 ntBASIC21.07■□□□□ 0.96
Sema4dO09126 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sema4dO09126 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sema4dO09126 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.07■□□□□ 0.96
Sema4dO09126 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sema4dO09126 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sema4dO09126 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Sema4dO09126 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.06■□□□□ 0.96
Sema4dO09126 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sema4dO09126 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sema4dO09126 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Sema4dO09126 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.05■□□□□ 0.96
Sema4dO09126 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.05■□□□□ 0.96
Sema4dO09126 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sema4dO09126 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sema4dO09126 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sema4dO09126 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sema4dO09126 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sema4dO09126 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sema4dO09126 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sema4dO09126 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sema4dO09126 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Sema4dO09126 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.04■□□□□ 0.96
Sema4dO09126 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Sema4dO09126 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sema4dO09126 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sema4dO09126 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Sema4dO09126 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.03■□□□□ 0.96
Sema4dO09126 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.03■□□□□ 0.96
Sema4dO09126 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Sema4dO09126 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sema4dO09126 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sema4dO09126 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sema4dO09126 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sema4dO09126 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sema4dO09126 Gm15039-201ENSMUST00000118914 875 ntBASIC21.02■□□□□ 0.96
Sema4dO09126 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.02■□□□□ 0.96
Sema4dO09126 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.02■□□□□ 0.96
Sema4dO09126 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.02■□□□□ 0.96
Sema4dO09126 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Sema4dO09126 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sema4dO09126 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Sema4dO09126 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Sema4dO09126 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Sema4dO09126 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Sema4dO09126 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Sema4dO09126 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.01■□□□□ 0.95
Sema4dO09126 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Sema4dO09126 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sema4dO09126 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.01■□□□□ 0.95
Sema4dO09126 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sema4dO09126 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sema4dO09126 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sema4dO09126 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sema4dO09126 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms