Protein–RNA interactions for Protein: O09113

Otp, Homeobox protein orthopedia, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtpO09113 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.29■□□□□ 0.36
OtpO09113 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.29■□□□□ 0.36
OtpO09113 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.29■□□□□ 0.36
OtpO09113 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.29■□□□□ 0.36
OtpO09113 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
OtpO09113 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
OtpO09113 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
OtpO09113 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
OtpO09113 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
OtpO09113 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
OtpO09113 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
OtpO09113 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
OtpO09113 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
OtpO09113 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
OtpO09113 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
OtpO09113 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.28■□□□□ 0.36
OtpO09113 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
OtpO09113 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
OtpO09113 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
OtpO09113 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.28■□□□□ 0.36
OtpO09113 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
OtpO09113 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.27■□□□□ 0.36
OtpO09113 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
OtpO09113 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
OtpO09113 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
OtpO09113 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
OtpO09113 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
OtpO09113 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
OtpO09113 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
OtpO09113 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
OtpO09113 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
OtpO09113 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
OtpO09113 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
OtpO09113 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
OtpO09113 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
OtpO09113 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
OtpO09113 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.26■□□□□ 0.35
OtpO09113 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
OtpO09113 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
OtpO09113 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.26■□□□□ 0.35
OtpO09113 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
OtpO09113 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
OtpO09113 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
OtpO09113 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
OtpO09113 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
OtpO09113 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
OtpO09113 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
OtpO09113 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
OtpO09113 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
OtpO09113 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
OtpO09113 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
OtpO09113 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
OtpO09113 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
OtpO09113 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
OtpO09113 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
OtpO09113 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
OtpO09113 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
OtpO09113 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
OtpO09113 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
OtpO09113 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.24■□□□□ 0.35
OtpO09113 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.24■□□□□ 0.35
OtpO09113 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.24■□□□□ 0.35
OtpO09113 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
OtpO09113 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
OtpO09113 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
OtpO09113 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
OtpO09113 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
OtpO09113 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
OtpO09113 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
OtpO09113 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
OtpO09113 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
OtpO09113 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.23■□□□□ 0.35
OtpO09113 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
OtpO09113 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
OtpO09113 Gm12922-201ENSMUST00000120626 809 ntBASIC17.23■□□□□ 0.35
OtpO09113 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
OtpO09113 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.23■□□□□ 0.35
OtpO09113 Gm9847-201ENSMUST00000052528 599 ntBASIC17.23■□□□□ 0.35
OtpO09113 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.23■□□□□ 0.35
OtpO09113 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
OtpO09113 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
OtpO09113 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
OtpO09113 Golph3-205ENSMUST00000228671 2842 ntBASIC17.23■□□□□ 0.35
OtpO09113 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
OtpO09113 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
OtpO09113 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
OtpO09113 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
OtpO09113 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
OtpO09113 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
OtpO09113 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
OtpO09113 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
OtpO09113 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.22■□□□□ 0.35
OtpO09113 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
OtpO09113 Gm21956-201ENSMUST00000179946 522 ntBASIC17.22■□□□□ 0.35
OtpO09113 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
OtpO09113 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
OtpO09113 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
OtpO09113 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
OtpO09113 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.22■□□□□ 0.35
OtpO09113 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms