Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ube3aO08759 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.97■□□□□ 0.95
Ube3aO08759 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.97■□□□□ 0.95
Ube3aO08759 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.97■□□□□ 0.95
Ube3aO08759 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ube3aO08759 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Ube3aO08759 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.97■□□□□ 0.95
Ube3aO08759 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Ube3aO08759 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ube3aO08759 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ube3aO08759 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ube3aO08759 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ube3aO08759 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ube3aO08759 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ube3aO08759 Gm9959-201ENSMUST00000068277 390 ntBASIC20.95■□□□□ 0.94
Ube3aO08759 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ube3aO08759 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Ube3aO08759 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ube3aO08759 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ube3aO08759 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ube3aO08759 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ube3aO08759 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Ube3aO08759 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ube3aO08759 Gm14117-201ENSMUST00000122417 843 ntBASIC20.94■□□□□ 0.94
Ube3aO08759 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.94■□□□□ 0.94
Ube3aO08759 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ube3aO08759 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ube3aO08759 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Ube3aO08759 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ube3aO08759 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ube3aO08759 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ube3aO08759 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Ube3aO08759 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ube3aO08759 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ube3aO08759 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ube3aO08759 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ube3aO08759 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ube3aO08759 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ube3aO08759 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ube3aO08759 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Ube3aO08759 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Ube3aO08759 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ube3aO08759 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Ube3aO08759 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ube3aO08759 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ube3aO08759 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ube3aO08759 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.92■□□□□ 0.94
Ube3aO08759 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Ube3aO08759 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ube3aO08759 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Ube3aO08759 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ube3aO08759 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ube3aO08759 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Ube3aO08759 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.92■□□□□ 0.94
Ube3aO08759 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ube3aO08759 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ube3aO08759 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ube3aO08759 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.91■□□□□ 0.94
Ube3aO08759 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ube3aO08759 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Ube3aO08759 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.91■□□□□ 0.94
Ube3aO08759 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.91■□□□□ 0.94
Ube3aO08759 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.91■□□□□ 0.94
Ube3aO08759 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ube3aO08759 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ube3aO08759 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
Ube3aO08759 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.9■□□□□ 0.94
Ube3aO08759 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.9■□□□□ 0.94
Ube3aO08759 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ube3aO08759 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.9■□□□□ 0.94
Ube3aO08759 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ube3aO08759 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ube3aO08759 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.9■□□□□ 0.94
Ube3aO08759 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ube3aO08759 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ube3aO08759 Gm9870-201ENSMUST00000063874 645 ntBASIC20.9■□□□□ 0.94
Ube3aO08759 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ube3aO08759 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Ube3aO08759 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ube3aO08759 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ube3aO08759 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ube3aO08759 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.94
Ube3aO08759 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ube3aO08759 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ube3aO08759 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ube3aO08759 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ube3aO08759 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ube3aO08759 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ube3aO08759 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
Ube3aO08759 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ube3aO08759 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ube3aO08759 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.88■□□□□ 0.93
Ube3aO08759 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ube3aO08759 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ube3aO08759 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.88■□□□□ 0.93
Ube3aO08759 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
Ube3aO08759 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ube3aO08759 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ube3aO08759 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ube3aO08759 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms