Protein–RNA interactions for Protein: O08604

Raet1c, Retinoic acid early-inducible protein 1-gamma, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1cO08604 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Raet1cO08604 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Raet1cO08604 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Raet1cO08604 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Raet1cO08604 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Raet1cO08604 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Raet1cO08604 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Raet1cO08604 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Raet1cO08604 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Raet1cO08604 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Raet1cO08604 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Raet1cO08604 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Raet1cO08604 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Raet1cO08604 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Raet1cO08604 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Raet1cO08604 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.33■□□□□ 0.37
Raet1cO08604 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Raet1cO08604 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Raet1cO08604 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Raet1cO08604 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Raet1cO08604 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Raet1cO08604 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.33■□□□□ 0.36
Raet1cO08604 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Raet1cO08604 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Raet1cO08604 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Raet1cO08604 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Raet1cO08604 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Raet1cO08604 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Raet1cO08604 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Raet1cO08604 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.32■□□□□ 0.36
Raet1cO08604 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Raet1cO08604 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Raet1cO08604 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Raet1cO08604 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.32■□□□□ 0.36
Raet1cO08604 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Raet1cO08604 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Raet1cO08604 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Raet1cO08604 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Raet1cO08604 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.32■□□□□ 0.36
Raet1cO08604 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Raet1cO08604 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Raet1cO08604 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Raet1cO08604 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.31■□□□□ 0.36
Raet1cO08604 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Raet1cO08604 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raet1cO08604 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Raet1cO08604 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Raet1cO08604 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Raet1cO08604 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Raet1cO08604 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Raet1cO08604 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.3■□□□□ 0.36
Raet1cO08604 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Raet1cO08604 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Raet1cO08604 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.3■□□□□ 0.36
Raet1cO08604 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Raet1cO08604 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.3■□□□□ 0.36
Raet1cO08604 Spcs1-204ENSMUST00000226782 949 ntBASIC17.3■□□□□ 0.36
Raet1cO08604 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Raet1cO08604 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Raet1cO08604 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Raet1cO08604 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Raet1cO08604 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Raet1cO08604 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.3■□□□□ 0.36
Raet1cO08604 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.3■□□□□ 0.36
Raet1cO08604 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Raet1cO08604 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Raet1cO08604 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.3■□□□□ 0.36
Raet1cO08604 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Raet1cO08604 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raet1cO08604 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raet1cO08604 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Raet1cO08604 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raet1cO08604 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Raet1cO08604 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raet1cO08604 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raet1cO08604 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.29■□□□□ 0.36
Raet1cO08604 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.29■□□□□ 0.36
Raet1cO08604 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raet1cO08604 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raet1cO08604 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raet1cO08604 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Raet1cO08604 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raet1cO08604 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raet1cO08604 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raet1cO08604 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Raet1cO08604 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raet1cO08604 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raet1cO08604 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raet1cO08604 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raet1cO08604 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Raet1cO08604 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.28■□□□□ 0.36
Raet1cO08604 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raet1cO08604 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raet1cO08604 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raet1cO08604 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raet1cO08604 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raet1cO08604 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raet1cO08604 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Raet1cO08604 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.27■□□□□ 0.36
Raet1cO08604 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms