Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav13d-3J3QMG8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav13d-3J3QMG8 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav13d-3J3QMG8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav13d-3J3QMG8 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav13d-3J3QMG8 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav13d-3J3QMG8 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav13d-3J3QMG8 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav13d-3J3QMG8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Trav13d-3J3QMG8 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav13d-3J3QMG8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav13d-3J3QMG8 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav13d-3J3QMG8 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav13d-3J3QMG8 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trav13d-3J3QMG8 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav13d-3J3QMG8 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav13d-3J3QMG8 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav13d-3J3QMG8 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trav13d-3J3QMG8 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav13d-3J3QMG8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trav13d-3J3QMG8 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav13d-3J3QMG8 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav13d-3J3QMG8 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trav13d-3J3QMG8 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trav13d-3J3QMG8 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav13d-3J3QMG8 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.11■□□□□ 0.33
Trav13d-3J3QMG8 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav13d-3J3QMG8 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Trav13d-3J3QMG8 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.11■□□□□ 0.33
Trav13d-3J3QMG8 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav13d-3J3QMG8 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav13d-3J3QMG8 Gm45417-201ENSMUST00000209533 758 ntBASIC17.11■□□□□ 0.33
Trav13d-3J3QMG8 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav13d-3J3QMG8 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trav13d-3J3QMG8 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav13d-3J3QMG8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.11■□□□□ 0.33
Trav13d-3J3QMG8 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav13d-3J3QMG8 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.1■□□□□ 0.33
Trav13d-3J3QMG8 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trav13d-3J3QMG8 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav13d-3J3QMG8 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav13d-3J3QMG8 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.1■□□□□ 0.33
Trav13d-3J3QMG8 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav13d-3J3QMG8 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav13d-3J3QMG8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav13d-3J3QMG8 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav13d-3J3QMG8 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav13d-3J3QMG8 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav13d-3J3QMG8 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.1■□□□□ 0.33
Trav13d-3J3QMG8 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav13d-3J3QMG8 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.1■□□□□ 0.33
Trav13d-3J3QMG8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav13d-3J3QMG8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav13d-3J3QMG8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav13d-3J3QMG8 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav13d-3J3QMG8 Gm8493-201ENSMUST00000196881 489 ntBASIC17.09■□□□□ 0.33
Trav13d-3J3QMG8 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav13d-3J3QMG8 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.09■□□□□ 0.33
Trav13d-3J3QMG8 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav13d-3J3QMG8 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav13d-3J3QMG8 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav13d-3J3QMG8 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav13d-3J3QMG8 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trav13d-3J3QMG8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav13d-3J3QMG8 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav13d-3J3QMG8 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav13d-3J3QMG8 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav13d-3J3QMG8 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Trav13d-3J3QMG8 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Trav13d-3J3QMG8 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav13d-3J3QMG8 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.08■□□□□ 0.32
Trav13d-3J3QMG8 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Trav13d-3J3QMG8 Gm43173-201ENSMUST00000202246 593 ntBASIC17.08■□□□□ 0.32
Trav13d-3J3QMG8 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.08■□□□□ 0.32
Trav13d-3J3QMG8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Trav13d-3J3QMG8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav13d-3J3QMG8 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trav13d-3J3QMG8 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav13d-3J3QMG8 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.07■□□□□ 0.32
Trav13d-3J3QMG8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.07■□□□□ 0.32
Trav13d-3J3QMG8 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav13d-3J3QMG8 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav13d-3J3QMG8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav13d-3J3QMG8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Trav13d-3J3QMG8 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav13d-3J3QMG8 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav13d-3J3QMG8 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav13d-3J3QMG8 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.06■□□□□ 0.32
Trav13d-3J3QMG8 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav13d-3J3QMG8 Gm6139-201ENSMUST00000079261 882 ntBASIC17.06■□□□□ 0.32
Trav13d-3J3QMG8 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav13d-3J3QMG8 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav13d-3J3QMG8 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav13d-3J3QMG8 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav13d-3J3QMG8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav13d-3J3QMG8 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.05■□□□□ 0.32
Trav13d-3J3QMG8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav13d-3J3QMG8 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav13d-3J3QMG8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav13d-3J3QMG8 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms