Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.94■□□□□ 0.78
Trim55G3X8Y1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Trim55G3X8Y1 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim55G3X8Y1 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.94■□□□□ 0.78
Trim55G3X8Y1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim55G3X8Y1 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim55G3X8Y1 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.94■□□□□ 0.78
Trim55G3X8Y1 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim55G3X8Y1 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim55G3X8Y1 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim55G3X8Y1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim55G3X8Y1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim55G3X8Y1 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim55G3X8Y1 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim55G3X8Y1 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim55G3X8Y1 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Trim55G3X8Y1 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim55G3X8Y1 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim55G3X8Y1 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim55G3X8Y1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim55G3X8Y1 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Trim55G3X8Y1 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim55G3X8Y1 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim55G3X8Y1 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim55G3X8Y1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim55G3X8Y1 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Trim55G3X8Y1 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim55G3X8Y1 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim55G3X8Y1 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim55G3X8Y1 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.92■□□□□ 0.78
Trim55G3X8Y1 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim55G3X8Y1 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim55G3X8Y1 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.92■□□□□ 0.78
Trim55G3X8Y1 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.92■□□□□ 0.78
Trim55G3X8Y1 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim55G3X8Y1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.92■□□□□ 0.78
Trim55G3X8Y1 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim55G3X8Y1 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim55G3X8Y1 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.92■□□□□ 0.78
Trim55G3X8Y1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Trim55G3X8Y1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim55G3X8Y1 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim55G3X8Y1 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim55G3X8Y1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim55G3X8Y1 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim55G3X8Y1 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim55G3X8Y1 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim55G3X8Y1 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim55G3X8Y1 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim55G3X8Y1 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim55G3X8Y1 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim55G3X8Y1 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Trim55G3X8Y1 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Trim55G3X8Y1 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim55G3X8Y1 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim55G3X8Y1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim55G3X8Y1 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim55G3X8Y1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim55G3X8Y1 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim55G3X8Y1 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim55G3X8Y1 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.9■□□□□ 0.78
Trim55G3X8Y1 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Trim55G3X8Y1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim55G3X8Y1 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim55G3X8Y1 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim55G3X8Y1 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.9■□□□□ 0.78
Trim55G3X8Y1 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim55G3X8Y1 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Trim55G3X8Y1 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.9■□□□□ 0.78
Trim55G3X8Y1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Trim55G3X8Y1 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Trim55G3X8Y1 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trim55G3X8Y1 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trim55G3X8Y1 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim55G3X8Y1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Trim55G3X8Y1 Gm45364-201ENSMUST00000210883 159 ntBASIC19.89■□□□□ 0.77
Trim55G3X8Y1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim55G3X8Y1 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim55G3X8Y1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim55G3X8Y1 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim55G3X8Y1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim55G3X8Y1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Trim55G3X8Y1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim55G3X8Y1 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim55G3X8Y1 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Trim55G3X8Y1 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim55G3X8Y1 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim55G3X8Y1 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim55G3X8Y1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim55G3X8Y1 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim55G3X8Y1 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
Trim55G3X8Y1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Trim55G3X8Y1 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim55G3X8Y1 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim55G3X8Y1 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim55G3X8Y1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim55G3X8Y1 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim55G3X8Y1 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim55G3X8Y1 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trim55G3X8Y1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms