Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Atf6F6VAN0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atf6F6VAN0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atf6F6VAN0 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atf6F6VAN0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.96■□□□□ 0.79
Atf6F6VAN0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atf6F6VAN0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atf6F6VAN0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atf6F6VAN0 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Atf6F6VAN0 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atf6F6VAN0 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
Atf6F6VAN0 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Atf6F6VAN0 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Atf6F6VAN0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atf6F6VAN0 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atf6F6VAN0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.96■□□□□ 0.79
Atf6F6VAN0 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.96■□□□□ 0.79
Atf6F6VAN0 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atf6F6VAN0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atf6F6VAN0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Atf6F6VAN0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Atf6F6VAN0 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Atf6F6VAN0 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Atf6F6VAN0 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Atf6F6VAN0 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.94■□□□□ 0.78
Atf6F6VAN0 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Atf6F6VAN0 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Atf6F6VAN0 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.94■□□□□ 0.78
Atf6F6VAN0 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.94■□□□□ 0.78
Atf6F6VAN0 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Atf6F6VAN0 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Atf6F6VAN0 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Atf6F6VAN0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Atf6F6VAN0 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Atf6F6VAN0 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Atf6F6VAN0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Atf6F6VAN0 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
Atf6F6VAN0 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.93■□□□□ 0.78
Atf6F6VAN0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.93■□□□□ 0.78
Atf6F6VAN0 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.93■□□□□ 0.78
Atf6F6VAN0 Spcs1-204ENSMUST00000226782 949 ntBASIC19.93■□□□□ 0.78
Atf6F6VAN0 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Atf6F6VAN0 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Atf6F6VAN0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Atf6F6VAN0 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Atf6F6VAN0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Atf6F6VAN0 Gm12251-201ENSMUST00000117893 792 ntBASIC19.92■□□□□ 0.78
Atf6F6VAN0 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.92■□□□□ 0.78
Atf6F6VAN0 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Atf6F6VAN0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Atf6F6VAN0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Atf6F6VAN0 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Atf6F6VAN0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.91■□□□□ 0.78
Atf6F6VAN0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Atf6F6VAN0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Atf6F6VAN0 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Atf6F6VAN0 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Atf6F6VAN0 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Atf6F6VAN0 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Atf6F6VAN0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Atf6F6VAN0 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Atf6F6VAN0 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.9■□□□□ 0.78
Atf6F6VAN0 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Atf6F6VAN0 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Atf6F6VAN0 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Atf6F6VAN0 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Atf6F6VAN0 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Atf6F6VAN0 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Atf6F6VAN0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.89■□□□□ 0.77
Atf6F6VAN0 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.89■□□□□ 0.77
Atf6F6VAN0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Atf6F6VAN0 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Atf6F6VAN0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
Atf6F6VAN0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Atf6F6VAN0 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.88■□□□□ 0.77
Atf6F6VAN0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Atf6F6VAN0 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.88■□□□□ 0.77
Atf6F6VAN0 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Atf6F6VAN0 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Atf6F6VAN0 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Atf6F6VAN0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Atf6F6VAN0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Atf6F6VAN0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Atf6F6VAN0 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.87■□□□□ 0.77
Atf6F6VAN0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atf6F6VAN0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.87■□□□□ 0.77
Atf6F6VAN0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Atf6F6VAN0 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Atf6F6VAN0 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Atf6F6VAN0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Atf6F6VAN0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Atf6F6VAN0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Atf6F6VAN0 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.87■□□□□ 0.77
Atf6F6VAN0 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Atf6F6VAN0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atf6F6VAN0 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atf6F6VAN0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atf6F6VAN0 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.87■□□□□ 0.77
Atf6F6VAN0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.86■□□□□ 0.77
Atf6F6VAN0 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms