Protein–RNA interactions for Protein: F6SW83

Gm10477, Predicted gene 10477, mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10477F6SW83 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm10477F6SW83 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm10477F6SW83 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.07■□□□□ 0.48
Gm10477F6SW83 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Gm10477F6SW83 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm10477F6SW83 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Gm10477F6SW83 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm10477F6SW83 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm10477F6SW83 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm10477F6SW83 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Gm10477F6SW83 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Gm10477F6SW83 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm10477F6SW83 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Gm10477F6SW83 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm10477F6SW83 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.06■□□□□ 0.48
Gm10477F6SW83 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm10477F6SW83 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm10477F6SW83 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm10477F6SW83 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Gm10477F6SW83 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Gm10477F6SW83 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm10477F6SW83 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm10477F6SW83 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm10477F6SW83 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Gm10477F6SW83 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Gm10477F6SW83 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm10477F6SW83 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm10477F6SW83 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm10477F6SW83 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Gm10477F6SW83 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.05■□□□□ 0.48
Gm10477F6SW83 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm10477F6SW83 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Gm10477F6SW83 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Gm10477F6SW83 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm10477F6SW83 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Gm10477F6SW83 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm10477F6SW83 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Gm10477F6SW83 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm10477F6SW83 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm10477F6SW83 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.05■□□□□ 0.48
Gm10477F6SW83 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.04■□□□□ 0.48
Gm10477F6SW83 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm10477F6SW83 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm10477F6SW83 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.04■□□□□ 0.48
Gm10477F6SW83 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm10477F6SW83 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Gm10477F6SW83 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Gm10477F6SW83 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm10477F6SW83 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.04■□□□□ 0.48
Gm10477F6SW83 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm10477F6SW83 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm10477F6SW83 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm10477F6SW83 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Gm10477F6SW83 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm10477F6SW83 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm10477F6SW83 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm10477F6SW83 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm10477F6SW83 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.03■□□□□ 0.48
Gm10477F6SW83 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm10477F6SW83 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm10477F6SW83 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.03■□□□□ 0.48
Gm10477F6SW83 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm10477F6SW83 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.03■□□□□ 0.48
Gm10477F6SW83 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm10477F6SW83 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Gm10477F6SW83 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.03■□□□□ 0.48
Gm10477F6SW83 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Gm10477F6SW83 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm10477F6SW83 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.02■□□□□ 0.48
Gm10477F6SW83 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.02■□□□□ 0.48
Gm10477F6SW83 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm10477F6SW83 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm10477F6SW83 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Gm10477F6SW83 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Gm10477F6SW83 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
Gm10477F6SW83 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.01■□□□□ 0.47
Gm10477F6SW83 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm10477F6SW83 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Gm10477F6SW83 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm10477F6SW83 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gm10477F6SW83 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm10477F6SW83 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.01■□□□□ 0.47
Gm10477F6SW83 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.01■□□□□ 0.47
Gm10477F6SW83 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm10477F6SW83 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.01■□□□□ 0.47
Gm10477F6SW83 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm10477F6SW83 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm10477F6SW83 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm10477F6SW83 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm10477F6SW83 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm10477F6SW83 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm10477F6SW83 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm10477F6SW83 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm10477F6SW83 Gm42939-201ENSMUST00000197514 2205 ntBASIC18■□□□□ 0.47
Gm10477F6SW83 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18■□□□□ 0.47
Gm10477F6SW83 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Gm10477F6SW83 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm10477F6SW83 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18■□□□□ 0.47
Gm10477F6SW83 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm10477F6SW83 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms