Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm28043E0CXC2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gm28043E0CXC2 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm28043E0CXC2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm28043E0CXC2 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gm28043E0CXC2 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm28043E0CXC2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.41■□□□□ 0.7
Gm28043E0CXC2 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm28043E0CXC2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Gm28043E0CXC2 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Gm28043E0CXC2 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm28043E0CXC2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Gm28043E0CXC2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
Gm28043E0CXC2 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.41■□□□□ 0.7
Gm28043E0CXC2 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gm28043E0CXC2 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm28043E0CXC2 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm28043E0CXC2 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm28043E0CXC2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm28043E0CXC2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm28043E0CXC2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm28043E0CXC2 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm28043E0CXC2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm28043E0CXC2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gm28043E0CXC2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gm28043E0CXC2 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.4■□□□□ 0.7
Gm28043E0CXC2 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.4■□□□□ 0.7
Gm28043E0CXC2 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm28043E0CXC2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm28043E0CXC2 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gm28043E0CXC2 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm28043E0CXC2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Gm28043E0CXC2 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gm28043E0CXC2 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm28043E0CXC2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.39■□□□□ 0.69
Gm28043E0CXC2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm28043E0CXC2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm28043E0CXC2 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm28043E0CXC2 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gm28043E0CXC2 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gm28043E0CXC2 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm28043E0CXC2 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm28043E0CXC2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gm28043E0CXC2 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm28043E0CXC2 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gm28043E0CXC2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm28043E0CXC2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm28043E0CXC2 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm28043E0CXC2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm28043E0CXC2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm28043E0CXC2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm28043E0CXC2 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm28043E0CXC2 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Gm28043E0CXC2 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.38■□□□□ 0.69
Gm28043E0CXC2 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gm28043E0CXC2 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Gm28043E0CXC2 Gm43530-201ENSMUST00000195920 274 ntBASIC19.38■□□□□ 0.69
Gm28043E0CXC2 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.38■□□□□ 0.69
Gm28043E0CXC2 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm28043E0CXC2 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gm28043E0CXC2 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm28043E0CXC2 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gm28043E0CXC2 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm28043E0CXC2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.38■□□□□ 0.69
Gm28043E0CXC2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm28043E0CXC2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm28043E0CXC2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Gm28043E0CXC2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm28043E0CXC2 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm28043E0CXC2 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.37■□□□□ 0.69
Gm28043E0CXC2 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.37■□□□□ 0.69
Gm28043E0CXC2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gm28043E0CXC2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm28043E0CXC2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm28043E0CXC2 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm28043E0CXC2 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Gm28043E0CXC2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm28043E0CXC2 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gm28043E0CXC2 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gm28043E0CXC2 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gm28043E0CXC2 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm28043E0CXC2 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gm28043E0CXC2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.36■□□□□ 0.69
Gm28043E0CXC2 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm28043E0CXC2 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm28043E0CXC2 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm28043E0CXC2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm28043E0CXC2 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm28043E0CXC2 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm28043E0CXC2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm28043E0CXC2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Gm28043E0CXC2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm28043E0CXC2 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm28043E0CXC2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm28043E0CXC2 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gm28043E0CXC2 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.35■□□□□ 0.69
Gm28043E0CXC2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm28043E0CXC2 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm28043E0CXC2 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm28043E0CXC2 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms