Protein–RNA interactions for Protein: D3YY23

Lonrf1, LON peptidase N-terminal domain and RING finger protein 1, mousemouse

Predictions only

Length 762 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lonrf1D3YY23 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lonrf1D3YY23 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lonrf1D3YY23 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lonrf1D3YY23 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lonrf1D3YY23 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lonrf1D3YY23 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lonrf1D3YY23 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lonrf1D3YY23 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Lonrf1D3YY23 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Lonrf1D3YY23 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.01■□□□□ 0.79
Lonrf1D3YY23 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lonrf1D3YY23 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lonrf1D3YY23 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.01■□□□□ 0.79
Lonrf1D3YY23 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Lonrf1D3YY23 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Lonrf1D3YY23 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lonrf1D3YY23 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lonrf1D3YY23 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lonrf1D3YY23 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lonrf1D3YY23 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lonrf1D3YY23 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Lonrf1D3YY23 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Lonrf1D3YY23 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lonrf1D3YY23 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20■□□□□ 0.79
Lonrf1D3YY23 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20■□□□□ 0.79
Lonrf1D3YY23 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lonrf1D3YY23 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20■□□□□ 0.79
Lonrf1D3YY23 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20■□□□□ 0.79
Lonrf1D3YY23 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20■□□□□ 0.79
Lonrf1D3YY23 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20■□□□□ 0.79
Lonrf1D3YY23 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Lonrf1D3YY23 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Lonrf1D3YY23 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lonrf1D3YY23 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lonrf1D3YY23 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lonrf1D3YY23 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
Lonrf1D3YY23 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Lonrf1D3YY23 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lonrf1D3YY23 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Lonrf1D3YY23 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.99■□□□□ 0.79
Lonrf1D3YY23 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Lonrf1D3YY23 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.99■□□□□ 0.79
Lonrf1D3YY23 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
Lonrf1D3YY23 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lonrf1D3YY23 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lonrf1D3YY23 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lonrf1D3YY23 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lonrf1D3YY23 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lonrf1D3YY23 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lonrf1D3YY23 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lonrf1D3YY23 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lonrf1D3YY23 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lonrf1D3YY23 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Lonrf1D3YY23 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lonrf1D3YY23 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
Lonrf1D3YY23 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Lonrf1D3YY23 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.98■□□□□ 0.79
Lonrf1D3YY23 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.98■□□□□ 0.79
Lonrf1D3YY23 Golgb1-201ENSMUST00000023534 498 ntBASIC19.98■□□□□ 0.79
Lonrf1D3YY23 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lonrf1D3YY23 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lonrf1D3YY23 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Lonrf1D3YY23 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lonrf1D3YY23 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lonrf1D3YY23 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lonrf1D3YY23 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Lonrf1D3YY23 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lonrf1D3YY23 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
Lonrf1D3YY23 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Lonrf1D3YY23 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lonrf1D3YY23 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lonrf1D3YY23 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.97■□□□□ 0.79
Lonrf1D3YY23 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lonrf1D3YY23 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lonrf1D3YY23 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lonrf1D3YY23 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.96■□□□□ 0.79
Lonrf1D3YY23 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Lonrf1D3YY23 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lonrf1D3YY23 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.96■□□□□ 0.79
Lonrf1D3YY23 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lonrf1D3YY23 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Lonrf1D3YY23 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Lonrf1D3YY23 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lonrf1D3YY23 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Lonrf1D3YY23 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.95■□□□□ 0.78
Lonrf1D3YY23 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lonrf1D3YY23 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lonrf1D3YY23 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lonrf1D3YY23 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lonrf1D3YY23 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Lonrf1D3YY23 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Lonrf1D3YY23 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lonrf1D3YY23 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lonrf1D3YY23 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lonrf1D3YY23 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lonrf1D3YY23 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
Lonrf1D3YY23 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.94■□□□□ 0.78
Lonrf1D3YY23 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lonrf1D3YY23 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.94■□□□□ 0.78
Lonrf1D3YY23 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms