Protein–RNA interactions for Protein: D3YV89

Mmp27, Matrix metalloproteinase, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp27D3YV89 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp27D3YV89 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp27D3YV89 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Mmp27D3YV89 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Mmp27D3YV89 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.37■□□□□ 0.21
Mmp27D3YV89 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.37■□□□□ 0.21
Mmp27D3YV89 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Mmp27D3YV89 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Mmp27D3YV89 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Mmp27D3YV89 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Mmp27D3YV89 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Mmp27D3YV89 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Mmp27D3YV89 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Mmp27D3YV89 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mmp27D3YV89 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.36■□□□□ 0.21
Mmp27D3YV89 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Mmp27D3YV89 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Mmp27D3YV89 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mmp27D3YV89 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mmp27D3YV89 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mmp27D3YV89 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mmp27D3YV89 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mmp27D3YV89 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Mmp27D3YV89 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.36■□□□□ 0.21
Mmp27D3YV89 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.36■□□□□ 0.21
Mmp27D3YV89 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.36■□□□□ 0.21
Mmp27D3YV89 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mmp27D3YV89 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mmp27D3YV89 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mmp27D3YV89 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.36■□□□□ 0.21
Mmp27D3YV89 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mmp27D3YV89 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Mmp27D3YV89 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mmp27D3YV89 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp27D3YV89 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp27D3YV89 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp27D3YV89 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp27D3YV89 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp27D3YV89 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp27D3YV89 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp27D3YV89 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Mmp27D3YV89 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp27D3YV89 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Mmp27D3YV89 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp27D3YV89 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Mmp27D3YV89 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp27D3YV89 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.35■□□□□ 0.21
Mmp27D3YV89 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp27D3YV89 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.35■□□□□ 0.21
Mmp27D3YV89 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp27D3YV89 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mmp27D3YV89 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Mmp27D3YV89 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.34■□□□□ 0.21
Mmp27D3YV89 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp27D3YV89 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp27D3YV89 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp27D3YV89 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp27D3YV89 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp27D3YV89 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp27D3YV89 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Mmp27D3YV89 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Mmp27D3YV89 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.34■□□□□ 0.21
Mmp27D3YV89 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Mmp27D3YV89 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.34■□□□□ 0.21
Mmp27D3YV89 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Mmp27D3YV89 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp27D3YV89 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp27D3YV89 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp27D3YV89 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp27D3YV89 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Mmp27D3YV89 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp27D3YV89 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Mmp27D3YV89 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Mmp27D3YV89 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Mmp27D3YV89 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.21
Mmp27D3YV89 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.33■□□□□ 0.21
Mmp27D3YV89 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Mmp27D3YV89 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.33■□□□□ 0.2
Mmp27D3YV89 Gm22238-201ENSMUST00000175222 88 ntBASIC16.33■□□□□ 0.2
Mmp27D3YV89 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp27D3YV89 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.33■□□□□ 0.2
Mmp27D3YV89 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp27D3YV89 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp27D3YV89 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Mmp27D3YV89 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp27D3YV89 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
Mmp27D3YV89 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp27D3YV89 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Mmp27D3YV89 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp27D3YV89 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp27D3YV89 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp27D3YV89 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Mmp27D3YV89 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Mmp27D3YV89 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Mmp27D3YV89 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp27D3YV89 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Mmp27D3YV89 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Mmp27D3YV89 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Mmp27D3YV89 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp27D3YV89 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms