Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Gm12887B1AVM1 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Gm12887B1AVM1 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm12887B1AVM1 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm12887B1AVM1 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm12887B1AVM1 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.73■□□□□ 0.11
Gm12887B1AVM1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Gm12887B1AVM1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Gm12887B1AVM1 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm12887B1AVM1 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm12887B1AVM1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
Gm12887B1AVM1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm12887B1AVM1 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Gm12887B1AVM1 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm12887B1AVM1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm12887B1AVM1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm12887B1AVM1 Gm10420-201ENSMUST00000121713 882 ntBASIC15.72■□□□□ 0.11
Gm12887B1AVM1 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm12887B1AVM1 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Gm12887B1AVM1 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm12887B1AVM1 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.72■□□□□ 0.11
Gm12887B1AVM1 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.72■□□□□ 0.11
Gm12887B1AVM1 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Gm12887B1AVM1 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Gm12887B1AVM1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Gm12887B1AVM1 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.71■□□□□ 0.11
Gm12887B1AVM1 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm12887B1AVM1 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Gm12887B1AVM1 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm12887B1AVM1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm12887B1AVM1 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm12887B1AVM1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm12887B1AVM1 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm12887B1AVM1 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm12887B1AVM1 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC15.71■□□□□ 0.11
Gm12887B1AVM1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Gm12887B1AVM1 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm12887B1AVM1 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Gm12887B1AVM1 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Gm12887B1AVM1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Gm12887B1AVM1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Gm12887B1AVM1 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm12887B1AVM1 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Gm12887B1AVM1 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm12887B1AVM1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm12887B1AVM1 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Gm12887B1AVM1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Gm12887B1AVM1 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm12887B1AVM1 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm12887B1AVM1 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Gm12887B1AVM1 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm12887B1AVM1 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC15.7■□□□□ 0.1
Gm12887B1AVM1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC15.7■□□□□ 0.1
Gm12887B1AVM1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm12887B1AVM1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm12887B1AVM1 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm12887B1AVM1 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Gm12887B1AVM1 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm12887B1AVM1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Gm12887B1AVM1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm12887B1AVM1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm12887B1AVM1 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Gm12887B1AVM1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm12887B1AVM1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm12887B1AVM1 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Gm12887B1AVM1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Gm12887B1AVM1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm12887B1AVM1 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Gm12887B1AVM1 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Gm12887B1AVM1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.69■□□□□ 0.1
Gm12887B1AVM1 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Gm12887B1AVM1 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm12887B1AVM1 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.69■□□□□ 0.1
Gm12887B1AVM1 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm12887B1AVM1 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm12887B1AVM1 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm12887B1AVM1 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm12887B1AVM1 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Gm12887B1AVM1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm12887B1AVM1 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm12887B1AVM1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm12887B1AVM1 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm12887B1AVM1 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm12887B1AVM1 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Gm12887B1AVM1 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Gm12887B1AVM1 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm12887B1AVM1 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Gm12887B1AVM1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Gm12887B1AVM1 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm12887B1AVM1 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm12887B1AVM1 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Gm12887B1AVM1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm12887B1AVM1 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm12887B1AVM1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Gm12887B1AVM1 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm12887B1AVM1 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm12887B1AVM1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC15.67■□□□□ 0.1
Gm12887B1AVM1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm12887B1AVM1 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm12887B1AVM1 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms