Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm11127A7VMS2 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.16■□□□□ 0.34
Gm11127A7VMS2 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm11127A7VMS2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm11127A7VMS2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm11127A7VMS2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gm11127A7VMS2 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm11127A7VMS2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm11127A7VMS2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.15■□□□□ 0.34
Gm11127A7VMS2 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm11127A7VMS2 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm11127A7VMS2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm11127A7VMS2 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm11127A7VMS2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.15■□□□□ 0.34
Gm11127A7VMS2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm11127A7VMS2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm11127A7VMS2 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm11127A7VMS2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.14■□□□□ 0.34
Gm11127A7VMS2 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm11127A7VMS2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.14■□□□□ 0.33
Gm11127A7VMS2 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Gm11127A7VMS2 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.14■□□□□ 0.33
Gm11127A7VMS2 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.14■□□□□ 0.33
Gm11127A7VMS2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.14■□□□□ 0.33
Gm11127A7VMS2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Gm11127A7VMS2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Gm11127A7VMS2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm11127A7VMS2 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.13■□□□□ 0.33
Gm11127A7VMS2 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm11127A7VMS2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Gm11127A7VMS2 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Gm11127A7VMS2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.13■□□□□ 0.33
Gm11127A7VMS2 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.13■□□□□ 0.33
Gm11127A7VMS2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm11127A7VMS2 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm11127A7VMS2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm11127A7VMS2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm11127A7VMS2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11127A7VMS2 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11127A7VMS2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11127A7VMS2 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11127A7VMS2 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.12■□□□□ 0.33
Gm11127A7VMS2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11127A7VMS2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.12■□□□□ 0.33
Gm11127A7VMS2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.12■□□□□ 0.33
Gm11127A7VMS2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11127A7VMS2 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.12■□□□□ 0.33
Gm11127A7VMS2 Gm40881-201ENSMUST00000223397 166 ntBASIC17.12■□□□□ 0.33
Gm11127A7VMS2 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Gm11127A7VMS2 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11127A7VMS2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11127A7VMS2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11127A7VMS2 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Gm11127A7VMS2 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11127A7VMS2 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11127A7VMS2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11127A7VMS2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11127A7VMS2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11127A7VMS2 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11127A7VMS2 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.11■□□□□ 0.33
Gm11127A7VMS2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
Gm11127A7VMS2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
Gm11127A7VMS2 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11127A7VMS2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11127A7VMS2 Grk6-206ENSMUST00000224995 2971 ntBASIC17.1■□□□□ 0.33
Gm11127A7VMS2 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11127A7VMS2 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11127A7VMS2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Gm11127A7VMS2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11127A7VMS2 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Gm11127A7VMS2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11127A7VMS2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11127A7VMS2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.1■□□□□ 0.33
Gm11127A7VMS2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11127A7VMS2 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11127A7VMS2 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11127A7VMS2 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11127A7VMS2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11127A7VMS2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11127A7VMS2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11127A7VMS2 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.1■□□□□ 0.33
Gm11127A7VMS2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11127A7VMS2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11127A7VMS2 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11127A7VMS2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
Gm11127A7VMS2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11127A7VMS2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Gm11127A7VMS2 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Gm11127A7VMS2 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11127A7VMS2 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.09■□□□□ 0.33
Gm11127A7VMS2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11127A7VMS2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Gm11127A7VMS2 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11127A7VMS2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11127A7VMS2 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11127A7VMS2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.09■□□□□ 0.33
Gm11127A7VMS2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Gm11127A7VMS2 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11127A7VMS2 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Gm11127A7VMS2 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms