Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a5A6H584 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a5A6H584 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC14.94□□□□□ -0.02
Col6a5A6H584 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a5A6H584 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a5A6H584 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a5A6H584 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a5A6H584 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Col6a5A6H584 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.94□□□□□ -0.02
Col6a5A6H584 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.94□□□□□ -0.02
Col6a5A6H584 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a5A6H584 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a5A6H584 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a5A6H584 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Col6a5A6H584 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a5A6H584 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a5A6H584 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.94□□□□□ -0.02
Col6a5A6H584 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a5A6H584 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.94□□□□□ -0.02
Col6a5A6H584 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a5A6H584 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a5A6H584 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a5A6H584 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a5A6H584 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a5A6H584 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a5A6H584 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.93□□□□□ -0.02
Col6a5A6H584 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Col6a5A6H584 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a5A6H584 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Col6a5A6H584 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a5A6H584 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a5A6H584 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a5A6H584 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a5A6H584 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a5A6H584 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC14.93□□□□□ -0.02
Col6a5A6H584 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.93□□□□□ -0.02
Col6a5A6H584 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.93□□□□□ -0.02
Col6a5A6H584 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a5A6H584 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a5A6H584 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a5A6H584 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a5A6H584 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Col6a5A6H584 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.92□□□□□ -0.02
Col6a5A6H584 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a5A6H584 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a5A6H584 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a5A6H584 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a5A6H584 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Col6a5A6H584 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a5A6H584 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col6a5A6H584 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a5A6H584 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a5A6H584 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a5A6H584 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a5A6H584 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC14.91□□□□□ -0.02
Col6a5A6H584 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col6a5A6H584 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a5A6H584 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a5A6H584 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a5A6H584 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a5A6H584 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.9□□□□□ -0.02
Col6a5A6H584 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a5A6H584 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a5A6H584 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a5A6H584 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a5A6H584 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a5A6H584 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a5A6H584 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a5A6H584 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a5A6H584 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
Col6a5A6H584 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col6a5A6H584 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.9□□□□□ -0.02
Col6a5A6H584 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a5A6H584 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Col6a5A6H584 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.89□□□□□ -0.03
Col6a5A6H584 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Col6a5A6H584 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a5A6H584 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a5A6H584 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a5A6H584 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC14.89□□□□□ -0.03
Col6a5A6H584 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a5A6H584 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a5A6H584 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a5A6H584 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a5A6H584 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
Col6a5A6H584 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC14.89□□□□□ -0.03
Col6a5A6H584 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a5A6H584 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a5A6H584 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.88□□□□□ -0.03
Col6a5A6H584 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a5A6H584 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a5A6H584 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a5A6H584 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a5A6H584 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.87□□□□□ -0.03
Col6a5A6H584 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.87□□□□□ -0.03
Col6a5A6H584 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a5A6H584 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.87□□□□□ -0.03
Col6a5A6H584 Gm5417-201ENSMUST00000079706 384 ntBASIC14.87□□□□□ -0.03
Col6a5A6H584 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a5A6H584 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms