Protein–RNA interactions for Protein: A3KMP2

Ttc38, Tetratricopeptide repeat protein 38, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc38A3KMP2 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Ttc38A3KMP2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ttc38A3KMP2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Ttc38A3KMP2 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Ttc38A3KMP2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Ttc38A3KMP2 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.2■□□□□ 0.98
Ttc38A3KMP2 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.2■□□□□ 0.98
Ttc38A3KMP2 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ttc38A3KMP2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ttc38A3KMP2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Ttc38A3KMP2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ttc38A3KMP2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.19■□□□□ 0.98
Ttc38A3KMP2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ttc38A3KMP2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ttc38A3KMP2 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.19■□□□□ 0.98
Ttc38A3KMP2 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ttc38A3KMP2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Ttc38A3KMP2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ttc38A3KMP2 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Ttc38A3KMP2 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ttc38A3KMP2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ttc38A3KMP2 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ttc38A3KMP2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ttc38A3KMP2 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ttc38A3KMP2 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.18■□□□□ 0.98
Ttc38A3KMP2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ttc38A3KMP2 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ttc38A3KMP2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ttc38A3KMP2 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ttc38A3KMP2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ttc38A3KMP2 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ttc38A3KMP2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ttc38A3KMP2 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ttc38A3KMP2 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.17■□□□□ 0.98
Ttc38A3KMP2 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ttc38A3KMP2 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ttc38A3KMP2 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.17■□□□□ 0.98
Ttc38A3KMP2 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ttc38A3KMP2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ttc38A3KMP2 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ttc38A3KMP2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ttc38A3KMP2 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ttc38A3KMP2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ttc38A3KMP2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ttc38A3KMP2 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ttc38A3KMP2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Ttc38A3KMP2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Ttc38A3KMP2 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.16■□□□□ 0.98
Ttc38A3KMP2 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ttc38A3KMP2 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ttc38A3KMP2 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ttc38A3KMP2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ttc38A3KMP2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ttc38A3KMP2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ttc38A3KMP2 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.15■□□□□ 0.98
Ttc38A3KMP2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ttc38A3KMP2 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ttc38A3KMP2 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ttc38A3KMP2 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Ttc38A3KMP2 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.15■□□□□ 0.98
Ttc38A3KMP2 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.15■□□□□ 0.98
Ttc38A3KMP2 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ttc38A3KMP2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ttc38A3KMP2 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ttc38A3KMP2 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ttc38A3KMP2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ttc38A3KMP2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ttc38A3KMP2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ttc38A3KMP2 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ttc38A3KMP2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21.14■□□□□ 0.97
Ttc38A3KMP2 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ttc38A3KMP2 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ttc38A3KMP2 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.14■□□□□ 0.97
Ttc38A3KMP2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ttc38A3KMP2 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ttc38A3KMP2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ttc38A3KMP2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ttc38A3KMP2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Ttc38A3KMP2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ttc38A3KMP2 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.14■□□□□ 0.97
Ttc38A3KMP2 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ttc38A3KMP2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ttc38A3KMP2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ttc38A3KMP2 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ttc38A3KMP2 Iqck-206ENSMUST00000208658 2891 ntBASIC21.13■□□□□ 0.97
Ttc38A3KMP2 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Ttc38A3KMP2 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ttc38A3KMP2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ttc38A3KMP2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ttc38A3KMP2 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ttc38A3KMP2 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ttc38A3KMP2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ttc38A3KMP2 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Ttc38A3KMP2 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ttc38A3KMP2 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ttc38A3KMP2 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
Ttc38A3KMP2 Gm8493-201ENSMUST00000196881 489 ntBASIC21.12■□□□□ 0.97
Ttc38A3KMP2 Gm43173-201ENSMUST00000202246 593 ntBASIC21.12■□□□□ 0.97
Ttc38A3KMP2 Gm45417-201ENSMUST00000209533 758 ntBASIC21.12■□□□□ 0.97
Ttc38A3KMP2 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms