Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
Scn1aA2APX8 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.57■□□□□ 0.88
Scn1aA2APX8 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn1aA2APX8 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Scn1aA2APX8 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn1aA2APX8 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Scn1aA2APX8 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn1aA2APX8 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scn1aA2APX8 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.56■□□□□ 0.88
Scn1aA2APX8 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scn1aA2APX8 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Scn1aA2APX8 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.56■□□□□ 0.88
Scn1aA2APX8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Scn1aA2APX8 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scn1aA2APX8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Scn1aA2APX8 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scn1aA2APX8 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scn1aA2APX8 Gm27405-201ENSMUST00000184201 112 ntBASIC20.56■□□□□ 0.88
Scn1aA2APX8 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Scn1aA2APX8 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scn1aA2APX8 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn1aA2APX8 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn1aA2APX8 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn1aA2APX8 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Scn1aA2APX8 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.55■□□□□ 0.88
Scn1aA2APX8 Gm42778-201ENSMUST00000199644 553 ntBASIC20.55■□□□□ 0.88
Scn1aA2APX8 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.55■□□□□ 0.88
Scn1aA2APX8 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.55■□□□□ 0.88
Scn1aA2APX8 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn1aA2APX8 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn1aA2APX8 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Scn1aA2APX8 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn1aA2APX8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Scn1aA2APX8 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Scn1aA2APX8 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn1aA2APX8 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Scn1aA2APX8 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.54■□□□□ 0.88
Scn1aA2APX8 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn1aA2APX8 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Scn1aA2APX8 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn1aA2APX8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Scn1aA2APX8 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Scn1aA2APX8 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn1aA2APX8 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn1aA2APX8 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn1aA2APX8 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn1aA2APX8 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Scn1aA2APX8 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.54■□□□□ 0.88
Scn1aA2APX8 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn1aA2APX8 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn1aA2APX8 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Scn1aA2APX8 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scn1aA2APX8 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Scn1aA2APX8 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.53■□□□□ 0.88
Scn1aA2APX8 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scn1aA2APX8 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scn1aA2APX8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scn1aA2APX8 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scn1aA2APX8 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Scn1aA2APX8 Gm7291-201ENSMUST00000199147 382 ntBASIC20.52■□□□□ 0.88
Scn1aA2APX8 Gm42569-201ENSMUST00000200539 472 ntBASIC20.52■□□□□ 0.88
Scn1aA2APX8 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scn1aA2APX8 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Scn1aA2APX8 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scn1aA2APX8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.87
Scn1aA2APX8 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Scn1aA2APX8 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
Scn1aA2APX8 Gm37179-201ENSMUST00000194862 823 ntBASIC20.51■□□□□ 0.87
Scn1aA2APX8 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.51■□□□□ 0.87
Scn1aA2APX8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.51■□□□□ 0.87
Scn1aA2APX8 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scn1aA2APX8 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.51■□□□□ 0.87
Scn1aA2APX8 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scn1aA2APX8 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.51■□□□□ 0.87
Scn1aA2APX8 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scn1aA2APX8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scn1aA2APX8 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.51■□□□□ 0.87
Scn1aA2APX8 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.51■□□□□ 0.87
Scn1aA2APX8 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.51■□□□□ 0.87
Scn1aA2APX8 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.51■□□□□ 0.87
Scn1aA2APX8 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.5■□□□□ 0.87
Scn1aA2APX8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Scn1aA2APX8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.5■□□□□ 0.87
Scn1aA2APX8 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.5■□□□□ 0.87
Scn1aA2APX8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Scn1aA2APX8 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.5■□□□□ 0.87
Scn1aA2APX8 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Scn1aA2APX8 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Scn1aA2APX8 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scn1aA2APX8 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Scn1aA2APX8 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Scn1aA2APX8 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scn1aA2APX8 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scn1aA2APX8 Gm38205-201ENSMUST00000192243 258 ntBASIC20.49■□□□□ 0.87
Scn1aA2APX8 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Scn1aA2APX8 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.49■□□□□ 0.87
Scn1aA2APX8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scn1aA2APX8 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scn1aA2APX8 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn1aA2APX8 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms