Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ubr4A2AN08 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ubr4A2AN08 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Ubr4A2AN08 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ubr4A2AN08 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ubr4A2AN08 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ubr4A2AN08 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC10.5□□□□□ -0.73
Ubr4A2AN08 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Ubr4A2AN08 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC10.49□□□□□ -0.73
Ubr4A2AN08 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Ubr4A2AN08 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ubr4A2AN08 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ubr4A2AN08 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ubr4A2AN08 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ubr4A2AN08 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ubr4A2AN08 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Ubr4A2AN08 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ubr4A2AN08 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Ubr4A2AN08 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ubr4A2AN08 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ubr4A2AN08 Gm37935-201ENSMUST00000192012 982 ntBASIC10.49□□□□□ -0.73
Ubr4A2AN08 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ubr4A2AN08 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Ubr4A2AN08 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Ubr4A2AN08 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ubr4A2AN08 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Ubr4A2AN08 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Ubr4A2AN08 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ubr4A2AN08 Gm10013-201ENSMUST00000106074 672 ntBASIC10.48□□□□□ -0.73
Ubr4A2AN08 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ubr4A2AN08 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Ubr4A2AN08 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC10.48□□□□□ -0.73
Ubr4A2AN08 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ubr4A2AN08 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ubr4A2AN08 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ubr4A2AN08 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ubr4A2AN08 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC10.48□□□□□ -0.73
Ubr4A2AN08 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC10.48□□□□□ -0.73
Ubr4A2AN08 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ubr4A2AN08 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ubr4A2AN08 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ubr4A2AN08 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ubr4A2AN08 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Ubr4A2AN08 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ubr4A2AN08 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ubr4A2AN08 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ubr4A2AN08 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Ubr4A2AN08 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC10.47□□□□□ -0.73
Ubr4A2AN08 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ubr4A2AN08 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC10.47□□□□□ -0.73
Ubr4A2AN08 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC10.47□□□□□ -0.73
Ubr4A2AN08 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC10.47□□□□□ -0.73
Ubr4A2AN08 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ubr4A2AN08 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ubr4A2AN08 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ubr4A2AN08 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ubr4A2AN08 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ubr4A2AN08 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ubr4A2AN08 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ubr4A2AN08 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ubr4A2AN08 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ubr4A2AN08 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ubr4A2AN08 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Ubr4A2AN08 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ubr4A2AN08 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Ubr4A2AN08 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC10.46□□□□□ -0.73
Ubr4A2AN08 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ubr4A2AN08 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ubr4A2AN08 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ubr4A2AN08 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Ubr4A2AN08 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ubr4A2AN08 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ubr4A2AN08 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ubr4A2AN08 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ubr4A2AN08 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ubr4A2AN08 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Ubr4A2AN08 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ubr4A2AN08 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC10.46□□□□□ -0.74
Ubr4A2AN08 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Ubr4A2AN08 Gm7791-201ENSMUST00000219066 539 ntBASIC10.46□□□□□ -0.74
Ubr4A2AN08 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Ubr4A2AN08 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Ubr4A2AN08 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ubr4A2AN08 Gm18666-201ENSMUST00000190039 958 ntBASIC10.46□□□□□ -0.74
Ubr4A2AN08 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC10.46□□□□□ -0.74
Ubr4A2AN08 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ubr4A2AN08 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC10.45□□□□□ -0.74
Ubr4A2AN08 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ubr4A2AN08 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ubr4A2AN08 Gm13559-201ENSMUST00000120476 863 ntBASIC10.45□□□□□ -0.74
Ubr4A2AN08 Gm28033-201ENSMUST00000184224 96 ntBASIC10.45□□□□□ -0.74
Ubr4A2AN08 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC10.45□□□□□ -0.74
Ubr4A2AN08 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ubr4A2AN08 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ubr4A2AN08 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ubr4A2AN08 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ubr4A2AN08 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ubr4A2AN08 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ubr4A2AN08 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ubr4A2AN08 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms