Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Gm13146-201ENSMUST00000118508 780 ntBASIC19.54■□□□□ 0.72
Gm3854A0A1B0GSS6 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm3854A0A1B0GSS6 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Gm3854A0A1B0GSS6 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm3854A0A1B0GSS6 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm3854A0A1B0GSS6 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm3854A0A1B0GSS6 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm3854A0A1B0GSS6 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Gm3854A0A1B0GSS6 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm3854A0A1B0GSS6 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Gm3854A0A1B0GSS6 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm3854A0A1B0GSS6 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.54■□□□□ 0.72
Gm3854A0A1B0GSS6 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm3854A0A1B0GSS6 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Gm3854A0A1B0GSS6 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Gm3854A0A1B0GSS6 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm3854A0A1B0GSS6 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Gm3854A0A1B0GSS6 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.53■□□□□ 0.72
Gm3854A0A1B0GSS6 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.53■□□□□ 0.72
Gm3854A0A1B0GSS6 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm3854A0A1B0GSS6 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Gm3854A0A1B0GSS6 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Gm3854A0A1B0GSS6 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm3854A0A1B0GSS6 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Gm3854A0A1B0GSS6 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.52■□□□□ 0.72
Gm3854A0A1B0GSS6 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
Gm3854A0A1B0GSS6 Gm10653-202ENSMUST00000139570 835 ntBASIC19.52■□□□□ 0.72
Gm3854A0A1B0GSS6 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.52■□□□□ 0.72
Gm3854A0A1B0GSS6 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.52■□□□□ 0.72
Gm3854A0A1B0GSS6 Gm4968-201ENSMUST00000071458 858 ntBASIC19.52■□□□□ 0.72
Gm3854A0A1B0GSS6 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.52■□□□□ 0.72
Gm3854A0A1B0GSS6 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Gm3854A0A1B0GSS6 AA386476-201ENSMUST00000098781 1665 ntBASIC19.52■□□□□ 0.71
Gm3854A0A1B0GSS6 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Gm3854A0A1B0GSS6 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Gm3854A0A1B0GSS6 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.51■□□□□ 0.71
Gm3854A0A1B0GSS6 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm3854A0A1B0GSS6 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm3854A0A1B0GSS6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Gm3854A0A1B0GSS6 Nespas-201ENSMUST00000143738 1083 ntBASIC19.51■□□□□ 0.71
Gm3854A0A1B0GSS6 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Gm3854A0A1B0GSS6 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.51■□□□□ 0.71
Gm3854A0A1B0GSS6 Gm6365-201ENSMUST00000054711 744 ntBASIC19.51■□□□□ 0.71
Gm3854A0A1B0GSS6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.51■□□□□ 0.71
Gm3854A0A1B0GSS6 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm3854A0A1B0GSS6 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm3854A0A1B0GSS6 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Gm3854A0A1B0GSS6 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
Gm3854A0A1B0GSS6 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
Gm3854A0A1B0GSS6 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Gm3854A0A1B0GSS6 Gm6420-201ENSMUST00000193885 723 ntBASIC19.5■□□□□ 0.71
Gm3854A0A1B0GSS6 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Gm3854A0A1B0GSS6 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.5■□□□□ 0.71
Gm3854A0A1B0GSS6 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm3854A0A1B0GSS6 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Gm3854A0A1B0GSS6 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm3854A0A1B0GSS6 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Gm3854A0A1B0GSS6 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Gm3854A0A1B0GSS6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm3854A0A1B0GSS6 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Gm3854A0A1B0GSS6 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm3854A0A1B0GSS6 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm3854A0A1B0GSS6 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.49■□□□□ 0.71
Gm3854A0A1B0GSS6 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.49■□□□□ 0.71
Gm3854A0A1B0GSS6 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.49■□□□□ 0.71
Gm3854A0A1B0GSS6 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm3854A0A1B0GSS6 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Gm3854A0A1B0GSS6 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.49■□□□□ 0.71
Gm3854A0A1B0GSS6 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm3854A0A1B0GSS6 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm3854A0A1B0GSS6 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm3854A0A1B0GSS6 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Gm3854A0A1B0GSS6 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm3854A0A1B0GSS6 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm3854A0A1B0GSS6 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.48■□□□□ 0.71
Gm3854A0A1B0GSS6 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.48■□□□□ 0.71
Gm3854A0A1B0GSS6 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm3854A0A1B0GSS6 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.48■□□□□ 0.71
Gm3854A0A1B0GSS6 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.48■□□□□ 0.71
Gm3854A0A1B0GSS6 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm3854A0A1B0GSS6 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Gm3854A0A1B0GSS6 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3854A0A1B0GSS6 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3854A0A1B0GSS6 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3854A0A1B0GSS6 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3854A0A1B0GSS6 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3854A0A1B0GSS6 Gm5408-201ENSMUST00000197998 747 ntBASIC19.47■□□□□ 0.71
Gm3854A0A1B0GSS6 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3854A0A1B0GSS6 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3854A0A1B0GSS6 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3854A0A1B0GSS6 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3854A0A1B0GSS6 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3854A0A1B0GSS6 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3854A0A1B0GSS6 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.47■□□□□ 0.71
Gm3854A0A1B0GSS6 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3854A0A1B0GSS6 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Gm3854A0A1B0GSS6 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.46■□□□□ 0.71
Gm3854A0A1B0GSS6 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3854A0A1B0GSS6 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.46■□□□□ 0.71
Gm3854A0A1B0GSS6 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms