Protein–RNA interactions for Protein: A0A140T8V5

Pcna-ps2, Proliferating cell nuclear antigen, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcna-ps2A0A140T8V5 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcna-ps2A0A140T8V5 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcna-ps2A0A140T8V5 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcna-ps2A0A140T8V5 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcna-ps2A0A140T8V5 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcna-ps2A0A140T8V5 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcna-ps2A0A140T8V5 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Pcna-ps2A0A140T8V5 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcna-ps2A0A140T8V5 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcna-ps2A0A140T8V5 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcna-ps2A0A140T8V5 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcna-ps2A0A140T8V5 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcna-ps2A0A140T8V5 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcna-ps2A0A140T8V5 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Pcna-ps2A0A140T8V5 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Pcna-ps2A0A140T8V5 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.46■□□□□ 0.71
Pcna-ps2A0A140T8V5 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcna-ps2A0A140T8V5 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcna-ps2A0A140T8V5 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcna-ps2A0A140T8V5 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcna-ps2A0A140T8V5 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Pcna-ps2A0A140T8V5 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcna-ps2A0A140T8V5 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Pcna-ps2A0A140T8V5 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcna-ps2A0A140T8V5 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcna-ps2A0A140T8V5 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcna-ps2A0A140T8V5 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcna-ps2A0A140T8V5 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcna-ps2A0A140T8V5 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Pcna-ps2A0A140T8V5 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcna-ps2A0A140T8V5 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Pcna-ps2A0A140T8V5 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcna-ps2A0A140T8V5 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcna-ps2A0A140T8V5 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Pcna-ps2A0A140T8V5 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcna-ps2A0A140T8V5 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcna-ps2A0A140T8V5 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Pcna-ps2A0A140T8V5 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcna-ps2A0A140T8V5 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.44■□□□□ 0.7
Pcna-ps2A0A140T8V5 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcna-ps2A0A140T8V5 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.44■□□□□ 0.7
Pcna-ps2A0A140T8V5 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcna-ps2A0A140T8V5 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcna-ps2A0A140T8V5 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcna-ps2A0A140T8V5 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Pcna-ps2A0A140T8V5 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.43■□□□□ 0.7
Pcna-ps2A0A140T8V5 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcna-ps2A0A140T8V5 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcna-ps2A0A140T8V5 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcna-ps2A0A140T8V5 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.43■□□□□ 0.7
Pcna-ps2A0A140T8V5 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcna-ps2A0A140T8V5 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcna-ps2A0A140T8V5 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcna-ps2A0A140T8V5 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcna-ps2A0A140T8V5 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Pcna-ps2A0A140T8V5 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.43■□□□□ 0.7
Pcna-ps2A0A140T8V5 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcna-ps2A0A140T8V5 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcna-ps2A0A140T8V5 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcna-ps2A0A140T8V5 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcna-ps2A0A140T8V5 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcna-ps2A0A140T8V5 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcna-ps2A0A140T8V5 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.42■□□□□ 0.7
Pcna-ps2A0A140T8V5 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcna-ps2A0A140T8V5 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.42■□□□□ 0.7
Pcna-ps2A0A140T8V5 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Pcna-ps2A0A140T8V5 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
Pcna-ps2A0A140T8V5 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.42■□□□□ 0.7
Pcna-ps2A0A140T8V5 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcna-ps2A0A140T8V5 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Pcna-ps2A0A140T8V5 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcna-ps2A0A140T8V5 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcna-ps2A0A140T8V5 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcna-ps2A0A140T8V5 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcna-ps2A0A140T8V5 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcna-ps2A0A140T8V5 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Pcna-ps2A0A140T8V5 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcna-ps2A0A140T8V5 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcna-ps2A0A140T8V5 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Pcna-ps2A0A140T8V5 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Pcna-ps2A0A140T8V5 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Pcna-ps2A0A140T8V5 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcna-ps2A0A140T8V5 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcna-ps2A0A140T8V5 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcna-ps2A0A140T8V5 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcna-ps2A0A140T8V5 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcna-ps2A0A140T8V5 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcna-ps2A0A140T8V5 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcna-ps2A0A140T8V5 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.4■□□□□ 0.7
Pcna-ps2A0A140T8V5 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcna-ps2A0A140T8V5 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.4■□□□□ 0.7
Pcna-ps2A0A140T8V5 Gm43137-201ENSMUST00000198052 594 ntBASIC19.4■□□□□ 0.7
Pcna-ps2A0A140T8V5 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.4■□□□□ 0.7
Pcna-ps2A0A140T8V5 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Pcna-ps2A0A140T8V5 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcna-ps2A0A140T8V5 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcna-ps2A0A140T8V5 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcna-ps2A0A140T8V5 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcna-ps2A0A140T8V5 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcna-ps2A0A140T8V5 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms