Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv17A0A140T8P8 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC14.88□□□□□ -0.03
Trbv17A0A140T8P8 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trbv17A0A140T8P8 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trbv17A0A140T8P8 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv17A0A140T8P8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv17A0A140T8P8 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv17A0A140T8P8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv17A0A140T8P8 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC14.88□□□□□ -0.03
Trbv17A0A140T8P8 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trbv17A0A140T8P8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv17A0A140T8P8 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trbv17A0A140T8P8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv17A0A140T8P8 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv17A0A140T8P8 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv17A0A140T8P8 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv17A0A140T8P8 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv17A0A140T8P8 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Trbv17A0A140T8P8 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv17A0A140T8P8 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC14.87□□□□□ -0.03
Trbv17A0A140T8P8 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC14.87□□□□□ -0.03
Trbv17A0A140T8P8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC14.87□□□□□ -0.03
Trbv17A0A140T8P8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv17A0A140T8P8 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv17A0A140T8P8 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv17A0A140T8P8 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv17A0A140T8P8 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trbv17A0A140T8P8 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv17A0A140T8P8 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv17A0A140T8P8 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC14.86□□□□□ -0.03
Trbv17A0A140T8P8 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv17A0A140T8P8 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv17A0A140T8P8 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv17A0A140T8P8 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trbv17A0A140T8P8 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC14.86□□□□□ -0.03
Trbv17A0A140T8P8 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv17A0A140T8P8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC14.86□□□□□ -0.03
Trbv17A0A140T8P8 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv17A0A140T8P8 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv17A0A140T8P8 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Trbv17A0A140T8P8 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv17A0A140T8P8 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv17A0A140T8P8 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trbv17A0A140T8P8 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trbv17A0A140T8P8 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv17A0A140T8P8 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC14.85□□□□□ -0.03
Trbv17A0A140T8P8 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC14.85□□□□□ -0.03
Trbv17A0A140T8P8 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv17A0A140T8P8 Gm43137-201ENSMUST00000198052 594 ntBASIC14.85□□□□□ -0.03
Trbv17A0A140T8P8 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Trbv17A0A140T8P8 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv17A0A140T8P8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv17A0A140T8P8 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trbv17A0A140T8P8 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv17A0A140T8P8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv17A0A140T8P8 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trbv17A0A140T8P8 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv17A0A140T8P8 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv17A0A140T8P8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Trbv17A0A140T8P8 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Trbv17A0A140T8P8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC14.84□□□□□ -0.03
Trbv17A0A140T8P8 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Trbv17A0A140T8P8 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv17A0A140T8P8 Gm5576-201ENSMUST00000075809 1236 ntBASIC14.84□□□□□ -0.03
Trbv17A0A140T8P8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv17A0A140T8P8 Iqck-206ENSMUST00000208658 2891 ntBASIC14.84□□□□□ -0.03
Trbv17A0A140T8P8 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trbv17A0A140T8P8 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv17A0A140T8P8 Gm27045-201ENSMUST00000182145 1402 ntBASIC14.83□□□□□ -0.03
Trbv17A0A140T8P8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.03
Trbv17A0A140T8P8 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv17A0A140T8P8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv17A0A140T8P8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
Trbv17A0A140T8P8 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv17A0A140T8P8 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Trbv17A0A140T8P8 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv17A0A140T8P8 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv17A0A140T8P8 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trbv17A0A140T8P8 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv17A0A140T8P8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv17A0A140T8P8 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Trbv17A0A140T8P8 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv17A0A140T8P8 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC14.83□□□□□ -0.04
Trbv17A0A140T8P8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv17A0A140T8P8 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv17A0A140T8P8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv17A0A140T8P8 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv17A0A140T8P8 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv17A0A140T8P8 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
Trbv17A0A140T8P8 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv17A0A140T8P8 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv17A0A140T8P8 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv17A0A140T8P8 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv17A0A140T8P8 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trbv17A0A140T8P8 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC14.82□□□□□ -0.04
Trbv17A0A140T8P8 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv17A0A140T8P8 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv17A0A140T8P8 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv17A0A140T8P8 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Trbv17A0A140T8P8 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms