Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc194A0A140LIT1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.34■□□□□ 0.69
Ccdc194A0A140LIT1 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Ccdc194A0A140LIT1 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc194A0A140LIT1 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc194A0A140LIT1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.33■□□□□ 0.69
Ccdc194A0A140LIT1 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc194A0A140LIT1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc194A0A140LIT1 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Ccdc194A0A140LIT1 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Ccdc194A0A140LIT1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Ccdc194A0A140LIT1 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Ccdc194A0A140LIT1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc194A0A140LIT1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc194A0A140LIT1 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.33■□□□□ 0.69
Ccdc194A0A140LIT1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.33■□□□□ 0.68
Ccdc194A0A140LIT1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.33■□□□□ 0.68
Ccdc194A0A140LIT1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc194A0A140LIT1 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.33■□□□□ 0.68
Ccdc194A0A140LIT1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc194A0A140LIT1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc194A0A140LIT1 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.32■□□□□ 0.68
Ccdc194A0A140LIT1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc194A0A140LIT1 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc194A0A140LIT1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Ccdc194A0A140LIT1 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc194A0A140LIT1 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc194A0A140LIT1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Ccdc194A0A140LIT1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc194A0A140LIT1 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc194A0A140LIT1 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc194A0A140LIT1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc194A0A140LIT1 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc194A0A140LIT1 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc194A0A140LIT1 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc194A0A140LIT1 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc194A0A140LIT1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc194A0A140LIT1 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc194A0A140LIT1 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc194A0A140LIT1 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.3■□□□□ 0.68
Ccdc194A0A140LIT1 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc194A0A140LIT1 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc194A0A140LIT1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.3■□□□□ 0.68
Ccdc194A0A140LIT1 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Ccdc194A0A140LIT1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc194A0A140LIT1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Ccdc194A0A140LIT1 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ccdc194A0A140LIT1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc194A0A140LIT1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc194A0A140LIT1 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc194A0A140LIT1 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc194A0A140LIT1 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Ccdc194A0A140LIT1 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
Ccdc194A0A140LIT1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc194A0A140LIT1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc194A0A140LIT1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Ccdc194A0A140LIT1 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.29■□□□□ 0.68
Ccdc194A0A140LIT1 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Ccdc194A0A140LIT1 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc194A0A140LIT1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc194A0A140LIT1 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc194A0A140LIT1 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.28■□□□□ 0.68
Ccdc194A0A140LIT1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc194A0A140LIT1 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc194A0A140LIT1 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc194A0A140LIT1 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Ccdc194A0A140LIT1 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc194A0A140LIT1 AA386476-201ENSMUST00000098781 1665 ntBASIC19.28■□□□□ 0.68
Ccdc194A0A140LIT1 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Ccdc194A0A140LIT1 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Ccdc194A0A140LIT1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc194A0A140LIT1 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc194A0A140LIT1 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc194A0A140LIT1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Ccdc194A0A140LIT1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.28■□□□□ 0.68
Ccdc194A0A140LIT1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc194A0A140LIT1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc194A0A140LIT1 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc194A0A140LIT1 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.28■□□□□ 0.68
Ccdc194A0A140LIT1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Ccdc194A0A140LIT1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc194A0A140LIT1 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc194A0A140LIT1 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Ccdc194A0A140LIT1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Ccdc194A0A140LIT1 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc194A0A140LIT1 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc194A0A140LIT1 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc194A0A140LIT1 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc194A0A140LIT1 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc194A0A140LIT1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc194A0A140LIT1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.27■□□□□ 0.67
Ccdc194A0A140LIT1 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc194A0A140LIT1 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc194A0A140LIT1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc194A0A140LIT1 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc194A0A140LIT1 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.26■□□□□ 0.67
Ccdc194A0A140LIT1 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc194A0A140LIT1 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc194A0A140LIT1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc194A0A140LIT1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms