Protein–RNA interactions for Protein: A0A0G2JEW2

Tcrg-V3, T cell receptor gamma, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V3A0A0G2JEW2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tcrg-V3A0A0G2JEW2 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tcrg-V3A0A0G2JEW2 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tcrg-V3A0A0G2JEW2 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tcrg-V3A0A0G2JEW2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tcrg-V3A0A0G2JEW2 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tcrg-V3A0A0G2JEW2 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Tcrg-V3A0A0G2JEW2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Tcrg-V3A0A0G2JEW2 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tcrg-V3A0A0G2JEW2 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tcrg-V3A0A0G2JEW2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.85■□□□□ 0.61
Tcrg-V3A0A0G2JEW2 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tcrg-V3A0A0G2JEW2 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tcrg-V3A0A0G2JEW2 Gm9988-201ENSMUST00000069786 435 ntBASIC18.85■□□□□ 0.61
Tcrg-V3A0A0G2JEW2 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Tcrg-V3A0A0G2JEW2 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tcrg-V3A0A0G2JEW2 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Tcrg-V3A0A0G2JEW2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tcrg-V3A0A0G2JEW2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.84■□□□□ 0.61
Tcrg-V3A0A0G2JEW2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tcrg-V3A0A0G2JEW2 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tcrg-V3A0A0G2JEW2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Tcrg-V3A0A0G2JEW2 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tcrg-V3A0A0G2JEW2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tcrg-V3A0A0G2JEW2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tcrg-V3A0A0G2JEW2 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.84■□□□□ 0.61
Tcrg-V3A0A0G2JEW2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tcrg-V3A0A0G2JEW2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tcrg-V3A0A0G2JEW2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Tcrg-V3A0A0G2JEW2 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tcrg-V3A0A0G2JEW2 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tcrg-V3A0A0G2JEW2 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Tcrg-V3A0A0G2JEW2 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Tcrg-V3A0A0G2JEW2 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.83■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.83■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.82■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.82■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Gm26571-201ENSMUST00000181399 666 ntBASIC18.81■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Gm42778-201ENSMUST00000199644 553 ntBASIC18.81■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.81■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.81■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.8■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.8■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.8■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.79■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.79■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tcrg-V3A0A0G2JEW2 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms