Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.44□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Hsf1-204ENSMUST00000226872 2104 ntBASIC14.44□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC14.43□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Gm43017-201ENSMUST00000198296 752 ntBASIC14.43□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC14.43□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv13-1A0A0B4J1P8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC14.42□□□□□ -0.1
Trbv13-1A0A0B4J1P8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Trbv13-1A0A0B4J1P8 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.42□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC14.41□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC14.41□□□□□ -0.1
Trbv13-1A0A0B4J1P8 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Wdr70-203ENSMUST00000227371 1130 ntBASIC14.41□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv13-1A0A0B4J1P8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv13-1A0A0B4J1P8 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv13-1A0A0B4J1P8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC14.41□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC14.4□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv13-1A0A0B4J1P8 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Gm2011-201ENSMUST00000203124 1263 ntBASIC14.4□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv13-1A0A0B4J1P8 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Gm7160-202ENSMUST00000188519 1027 ntBASIC14.39□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.39□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC14.38□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms