Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Trav11A0A0B4J1J9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav11A0A0B4J1J9 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav11A0A0B4J1J9 Gm10399-202ENSMUST00000202768 748 ntBASIC13.35□□□□□ -0.27
Trav11A0A0B4J1J9 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav11A0A0B4J1J9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trav11A0A0B4J1J9 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav11A0A0B4J1J9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav11A0A0B4J1J9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav11A0A0B4J1J9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav11A0A0B4J1J9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav11A0A0B4J1J9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav11A0A0B4J1J9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav11A0A0B4J1J9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav11A0A0B4J1J9 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav11A0A0B4J1J9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav11A0A0B4J1J9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav11A0A0B4J1J9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav11A0A0B4J1J9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav11A0A0B4J1J9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav11A0A0B4J1J9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav11A0A0B4J1J9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav11A0A0B4J1J9 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav11A0A0B4J1J9 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav11A0A0B4J1J9 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC13.34□□□□□ -0.27
Trav11A0A0B4J1J9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC13.34□□□□□ -0.27
Trav11A0A0B4J1J9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav11A0A0B4J1J9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Trav11A0A0B4J1J9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav11A0A0B4J1J9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav11A0A0B4J1J9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav11A0A0B4J1J9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav11A0A0B4J1J9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav11A0A0B4J1J9 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav11A0A0B4J1J9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Trav11A0A0B4J1J9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav11A0A0B4J1J9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav11A0A0B4J1J9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Trav11A0A0B4J1J9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav11A0A0B4J1J9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav11A0A0B4J1J9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav11A0A0B4J1J9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav11A0A0B4J1J9 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav11A0A0B4J1J9 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav11A0A0B4J1J9 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav11A0A0B4J1J9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav11A0A0B4J1J9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav11A0A0B4J1J9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav11A0A0B4J1J9 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav11A0A0B4J1J9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav11A0A0B4J1J9 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav11A0A0B4J1J9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav11A0A0B4J1J9 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav11A0A0B4J1J9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav11A0A0B4J1J9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav11A0A0B4J1J9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav11A0A0B4J1J9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav11A0A0B4J1J9 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav11A0A0B4J1J9 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav11A0A0B4J1J9 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav11A0A0B4J1J9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav11A0A0B4J1J9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav11A0A0B4J1J9 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav11A0A0B4J1J9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav11A0A0B4J1J9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC13.32□□□□□ -0.28
Trav11A0A0B4J1J9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav11A0A0B4J1J9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav11A0A0B4J1J9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav11A0A0B4J1J9 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav11A0A0B4J1J9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav11A0A0B4J1J9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav11A0A0B4J1J9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav11A0A0B4J1J9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav11A0A0B4J1J9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav11A0A0B4J1J9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav11A0A0B4J1J9 Cdkn3-203ENSMUST00000227149 1952 ntBASIC13.31□□□□□ -0.28
Trav11A0A0B4J1J9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav11A0A0B4J1J9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav11A0A0B4J1J9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav11A0A0B4J1J9 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC13.31□□□□□ -0.28
Trav11A0A0B4J1J9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav11A0A0B4J1J9 Golph3-205ENSMUST00000228671 2842 ntBASIC13.31□□□□□ -0.28
Trav11A0A0B4J1J9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Trav11A0A0B4J1J9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav11A0A0B4J1J9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav11A0A0B4J1J9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav11A0A0B4J1J9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav11A0A0B4J1J9 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav11A0A0B4J1J9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav11A0A0B4J1J9 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav11A0A0B4J1J9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav11A0A0B4J1J9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav11A0A0B4J1J9 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav11A0A0B4J1J9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Trav11A0A0B4J1J9 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav11A0A0B4J1J9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav11A0A0B4J1J9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav11A0A0B4J1J9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav11A0A0B4J1J9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav11A0A0B4J1J9 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms