Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
Trbv20A0A0B4J1H5 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv20A0A0B4J1H5 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv20A0A0B4J1H5 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv20A0A0B4J1H5 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv20A0A0B4J1H5 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv20A0A0B4J1H5 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv20A0A0B4J1H5 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv20A0A0B4J1H5 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv20A0A0B4J1H5 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.41■□□□□ 0.38
Trbv20A0A0B4J1H5 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.41■□□□□ 0.38
Trbv20A0A0B4J1H5 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv20A0A0B4J1H5 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv20A0A0B4J1H5 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv20A0A0B4J1H5 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.41■□□□□ 0.38
Trbv20A0A0B4J1H5 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Trbv20A0A0B4J1H5 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv20A0A0B4J1H5 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv20A0A0B4J1H5 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbv20A0A0B4J1H5 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trbv20A0A0B4J1H5 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.4■□□□□ 0.38
Trbv20A0A0B4J1H5 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbv20A0A0B4J1H5 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbv20A0A0B4J1H5 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.4■□□□□ 0.38
Trbv20A0A0B4J1H5 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.4■□□□□ 0.38
Trbv20A0A0B4J1H5 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.4■□□□□ 0.38
Trbv20A0A0B4J1H5 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trbv20A0A0B4J1H5 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trbv20A0A0B4J1H5 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv20A0A0B4J1H5 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv20A0A0B4J1H5 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv20A0A0B4J1H5 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv20A0A0B4J1H5 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv20A0A0B4J1H5 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv20A0A0B4J1H5 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Trbv20A0A0B4J1H5 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv20A0A0B4J1H5 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv20A0A0B4J1H5 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Trbv20A0A0B4J1H5 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv20A0A0B4J1H5 Grk6-206ENSMUST00000224995 2971 ntBASIC17.39■□□□□ 0.37
Trbv20A0A0B4J1H5 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.39■□□□□ 0.37
Trbv20A0A0B4J1H5 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv20A0A0B4J1H5 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv20A0A0B4J1H5 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trbv20A0A0B4J1H5 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.38■□□□□ 0.37
Trbv20A0A0B4J1H5 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv20A0A0B4J1H5 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Trbv20A0A0B4J1H5 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.38■□□□□ 0.37
Trbv20A0A0B4J1H5 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv20A0A0B4J1H5 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.38■□□□□ 0.37
Trbv20A0A0B4J1H5 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.38■□□□□ 0.37
Trbv20A0A0B4J1H5 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv20A0A0B4J1H5 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv20A0A0B4J1H5 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trbv20A0A0B4J1H5 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv20A0A0B4J1H5 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.38■□□□□ 0.37
Trbv20A0A0B4J1H5 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv20A0A0B4J1H5 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv20A0A0B4J1H5 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv20A0A0B4J1H5 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv20A0A0B4J1H5 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.38■□□□□ 0.37
Trbv20A0A0B4J1H5 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv20A0A0B4J1H5 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv20A0A0B4J1H5 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trbv20A0A0B4J1H5 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv20A0A0B4J1H5 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv20A0A0B4J1H5 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv20A0A0B4J1H5 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv20A0A0B4J1H5 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.37■□□□□ 0.37
Trbv20A0A0B4J1H5 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv20A0A0B4J1H5 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trbv20A0A0B4J1H5 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv20A0A0B4J1H5 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv20A0A0B4J1H5 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv20A0A0B4J1H5 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trbv20A0A0B4J1H5 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv20A0A0B4J1H5 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv20A0A0B4J1H5 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv20A0A0B4J1H5 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv20A0A0B4J1H5 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.36■□□□□ 0.37
Trbv20A0A0B4J1H5 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv20A0A0B4J1H5 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.36■□□□□ 0.37
Trbv20A0A0B4J1H5 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv20A0A0B4J1H5 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv20A0A0B4J1H5 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.36■□□□□ 0.37
Trbv20A0A0B4J1H5 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv20A0A0B4J1H5 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Trbv20A0A0B4J1H5 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv20A0A0B4J1H5 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv20A0A0B4J1H5 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv20A0A0B4J1H5 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv20A0A0B4J1H5 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv20A0A0B4J1H5 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv20A0A0B4J1H5 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv20A0A0B4J1H5 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv20A0A0B4J1H5 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv20A0A0B4J1H5 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Trbv20A0A0B4J1H5 Gm10399-202ENSMUST00000202768 748 ntBASIC17.35■□□□□ 0.37
Trbv20A0A0B4J1H5 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv20A0A0B4J1H5 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 208.6 ms